Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 AP001962.1-201ENST00000624114 559 ntBASIC7.66□□□□□ -1.18
CCNA1P78396 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
CCNA1P78396 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CCNA1P78396 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.65□□□□□ -1.18
CCNA1P78396 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CCNA1P78396 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 RN7SKP296-201ENST00000411185 341 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 AC108479.1-201ENST00000431142 427 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 GTF3AP6-201ENST00000432585 986 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 AC069154.1-201ENST00000432914 542 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 AC007679.3-201ENST00000434035 414 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 HMGN1P2-201ENST00000445197 310 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.65□□□□□ -1.18
CCNA1P78396 RPL12P24-201ENST00000474907 486 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CCNA1P78396 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.65□□□□□ -1.18
CCNA1P78396 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CCNA1P78396 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.65□□□□□ -1.18
CCNA1P78396 RN7SL404P-201ENST00000582421 281 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 AC026898.1-201ENST00000586404 571 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 AC015982.1-201ENST00000608113 465 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CCNA1P78396 RN7SL261P-201ENST00000613441 282 ntBASIC7.65□□□□□ -1.18
CCNA1P78396 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CCNA1P78396 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.65□□□□□ -1.18
CCNA1P78396 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CCNA1P78396 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCNA1P78396 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.65□□□□□ -1.19
CCNA1P78396 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.65□□□□□ -1.19
CCNA1P78396 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.65□□□□□ -1.19
CCNA1P78396 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
CCNA1P78396 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.65□□□□□ -1.19
CCNA1P78396 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.64□□□□□ -1.19
CCNA1P78396 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.64□□□□□ -1.19
CCNA1P78396 DDX43P1-201ENST00000510713 1763 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AF131215.2-201ENST00000531549 1710 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 AL355974.1-201ENST00000618896 1708 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 OR4C1P-202ENST00000641065 1569 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.64□□□□□ -1.19
CCNA1P78396 AC005702.3-201ENST00000585345 1447 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.64□□□□□ -1.19
CCNA1P78396 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.64□□□□□ -1.19
CCNA1P78396 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CCNA1P78396 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.64□□□□□ -1.19
CCNA1P78396 AC115283.1-201ENST00000427353 400 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AC133965.1-201ENST00000452984 354 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 SULT1D1P-201ENST00000458020 882 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AC108103.1-201ENST00000511286 446 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.64□□□□□ -1.19
CCNA1P78396 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 AC133552.4-201ENST00000576103 676 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AC004805.3-201ENST00000603178 310 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.64□□□□□ -1.19
CCNA1P78396 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 AC005614.1-201ENST00000598952 3653 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 Z97989.1-201ENST00000531702 2421 ntBASIC7.64□□□□□ -1.19
CCNA1P78396 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CCNA1P78396 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.64□□□□□ -1.19
CCNA1P78396 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCNA1P78396 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCNA1P78396 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms