Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.68
RPL39P62891 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RPL39P62891 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 AC127024.8-201ENST00000623719 2094 ntBASIC4.58□□□□□ -1.68
RPL39P62891 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 ZNF806-201ENST00000438300 1774 ntBASIC4.58□□□□□ -1.68
RPL39P62891 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 AL512353.3-201ENST00000417517 1326 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RPL39P62891 OR10D1P-201ENST00000355343 936 ntBASIC4.58□□□□□ -1.68
RPL39P62891 RAN-201ENST00000392367 780 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 OR7E91P-201ENST00000400027 866 ntBASIC4.58□□□□□ -1.68
RPL39P62891 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 GAPDHP69-201ENST00000425504 1008 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC4.58□□□□□ -1.68
RPL39P62891 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.58□□□□□ -1.68
RPL39P62891 PFN1P11-201ENST00000445829 389 ntBASIC4.58□□□□□ -1.68
RPL39P62891 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 RPL7P14-201ENST00000449851 741 ntBASIC4.58□□□□□ -1.68
RPL39P62891 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 RPSAP48-201ENST00000466509 889 ntBASIC4.58□□□□□ -1.68
RPL39P62891 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.58□□□□□ -1.68
RPL39P62891 RPS26P6-201ENST00000475156 348 ntBASIC4.58□□□□□ -1.68
RPL39P62891 PPP1R2P6-201ENST00000478565 588 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC091965.3-201ENST00000506236 208 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.58□□□□□ -1.68
RPL39P62891 EIF3KP1-201ENST00000513279 656 ntBASIC4.58□□□□□ -1.68
RPL39P62891 SCARNA18.2-201ENST00000516882 84 ntBASIC4.58□□□□□ -1.68
RPL39P62891 RN7SKP11-201ENST00000517018 287 ntBASIC4.58□□□□□ -1.68
RPL39P62891 IGLC4-201ENST00000517690 248 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.58□□□□□ -1.68
RPL39P62891 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.58□□□□□ -1.68
RPL39P62891 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 AL590032.1-201ENST00000604920 252 ntBASIC4.58□□□□□ -1.68
RPL39P62891 RN7SL820P-201ENST00000616437 299 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AP001264.1-201ENST00000620602 703 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC018692.2-201ENST00000624130 348 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC114546.4-201ENST00000624413 369 ntBASIC4.58□□□□□ -1.68
RPL39P62891 AC008626.2-201ENST00000624425 248 ntBASIC4.58□□□□□ -1.68
RPL39P62891 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RPL39P62891 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPL39P62891 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.58□□□□□ -1.68
RPL39P62891 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
RPL39P62891 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RPL39P62891 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
RPL39P62891 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
RPL39P62891 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPL39P62891 AC015799.1-201ENST00000622996 3122 ntBASIC4.57□□□□□ -1.68
RPL39P62891 SHQ1P1-201ENST00000437111 1544 ntBASIC4.57□□□□□ -1.68
RPL39P62891 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.57□□□□□ -1.68
RPL39P62891 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RPL39P62891 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RPL39P62891 AC110373.1-201ENST00000505994 3505 ntBASIC4.57□□□□□ -1.68
RPL39P62891 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPL39P62891 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.57□□□□□ -1.68
RPL39P62891 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.57□□□□□ -1.68
RPL39P62891 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPL39P62891 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RPL39P62891 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RPL39P62891 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RPL39P62891 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.57□□□□□ -1.68
RPL39P62891 RNA5SP474-201ENST00000391234 90 ntBASIC4.57□□□□□ -1.68
RPL39P62891 PCNAP3-201ENST00000397222 778 ntBASIC4.57□□□□□ -1.68
RPL39P62891 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.57□□□□□ -1.68
RPL39P62891 RN7SKP236-201ENST00000410635 284 ntBASIC4.57□□□□□ -1.68
RPL39P62891 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC4.57□□□□□ -1.68
RPL39P62891 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.57□□□□□ -1.68
RPL39P62891 HMGA1P8-201ENST00000414130 321 ntBASIC4.57□□□□□ -1.68
RPL39P62891 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC4.57□□□□□ -1.68
RPL39P62891 AC023141.1-201ENST00000419418 379 ntBASIC4.57□□□□□ -1.68
RPL39P62891 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC4.57□□□□□ -1.68
RPL39P62891 AL357632.1-201ENST00000426688 643 ntBASIC4.57□□□□□ -1.68
RPL39P62891 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.57□□□□□ -1.68
RPL39P62891 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms