Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC012501.2-201ENST00000437634 1281 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RPSAP40-201ENST00000442343 891 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC023271.1-201ENST00000445936 1090 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 LINC00307-201ENST00000451410 424 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RN7SL231P-201ENST00000461840 272 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RN7SL197P-201ENST00000466981 299 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RN7SL7P-201ENST00000467823 298 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 MYL6P4-201ENST00000477911 453 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RN7SL379P-201ENST00000479912 293 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AL355076.1-201ENST00000484315 270 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 TRBV5-2-201ENST00000489095 273 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC091849.1-201ENST00000509920 121 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 snoU109.5-201ENST00000516231 132 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 TMEM97P2-201ENST00000517841 403 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC079866.1-201ENST00000534985 1220 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC068993.1-201ENST00000546724 589 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 DPPA3P2-202ENST00000557188 1219 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 MIR4314-201ENST00000583321 92 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 EIF5AP3-201ENST00000589460 462 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC010719.1-201ENST00000602992 747 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RPL23AP90-201ENST00000603820 236 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC021321.1-201ENST00000607397 1113 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC096708.4-201ENST00000620563 552 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC005383.1-201ENST00000622689 534 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 AC245100.4-207ENST00000640776 1082 ntBASIC4.78□□□□□ -1.64
HIST1H2BDP58876 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HIST1H2BDP58876 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
HIST1H2BDP58876 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AL137058.3-201ENST00000624531 3099 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 TMOD2-202ENST00000435126 1490 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 MIRLET7E-201ENST00000362102 79 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 RN7SKP45-201ENST00000363509 304 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 RPL7-203ENST00000396466 762 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 CYCSP17-201ENST00000407870 315 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 PPIAP2-201ENST00000414143 492 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 METTL15P3-201ENST00000415522 1221 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AL390840.1-201ENST00000420303 988 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 FKBP1AP3-201ENST00000423650 319 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 SNX18P14-201ENST00000429308 574 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 GAPDHP75-201ENST00000433910 943 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AL731534.1-201ENST00000434711 269 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 IFITM4P-207ENST00000441380 420 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC079781.1-201ENST00000441505 394 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 RPL12P24-201ENST00000474907 486 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC023424.1-201ENST00000496058 459 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 IBA57-AS1-202ENST00000496552 594 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC116359.1-201ENST00000510731 1099 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 SNORA33.3-201ENST00000516236 136 ntBASIC4.77□□□□□ -1.65
HIST1H2BDP58876 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H2BDP58876 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms