Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 AL035696.2-201ENST00000407941 709 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.4□□□□□ -1.06
COL15A1P39059 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.4□□□□□ -1.06
COL15A1P39059 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.4□□□□□ -1.06
COL15A1P39059 DUTP4-201ENST00000424782 475 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC8.4□□□□□ -1.06
COL15A1P39059 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC8.4□□□□□ -1.06
COL15A1P39059 AC110602.1-201ENST00000437414 318 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 AC117395.1-201ENST00000487390 403 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.4□□□□□ -1.06
COL15A1P39059 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 SNX18P25-201ENST00000510539 758 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.4□□□□□ -1.06
COL15A1P39059 IGKV3D-34-201ENST00000522638 302 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 PVT1-214ENST00000522875 922 ntTSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 AC008429.2-201ENST00000523057 864 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.4□□□□□ -1.06
COL15A1P39059 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC8.4□□□□□ -1.06
COL15A1P39059 U1.41-201ENST00000617626 165 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 OR1N1-202ENST00000619659 939 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 MIR8089-201ENST00000620165 82 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 TSHZ2-205ENST00000626626 670 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 AC104966.1-201ENST00000467010 1464 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
COL15A1P39059 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
COL15A1P39059 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
COL15A1P39059 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
COL15A1P39059 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
COL15A1P39059 TTC3P1-201ENST00000399586 6081 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.39□□□□□ -1.07
COL15A1P39059 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
COL15A1P39059 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
COL15A1P39059 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 RPL31P11-201ENST00000426558 1558 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.39□□□□□ -1.07
COL15A1P39059 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 RNA5SP435-201ENST00000364044 108 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 AC005522.1-201ENST00000395416 346 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 DHFRP2-201ENST00000414224 547 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 AC018638.3-201ENST00000461273 132 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.39□□□□□ -1.07
COL15A1P39059 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
COL15A1P39059 RN7SL221P-201ENST00000466190 281 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.39□□□□□ -1.07
COL15A1P39059 AL162632.2-201ENST00000553933 399 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.39□□□□□ -1.07
COL15A1P39059 RPSAP75-201ENST00000605848 301 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.39□□□□□ -1.07
COL15A1P39059 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
COL15A1P39059 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
COL15A1P39059 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.39□□□□□ -1.07
COL15A1P39059 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 CASC19-246ENST00000641625 1606 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.39□□□□□ -1.07
COL15A1P39059 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
COL15A1P39059 AC062029.1-202ENST00000606164 3651 ntBASIC8.39□□□□□ -1.07
COL15A1P39059 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.39□□□□□ -1.07
COL15A1P39059 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
COL15A1P39059 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
COL15A1P39059 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 AC093278.2-201ENST00000564956 2485 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.38□□□□□ -1.07
COL15A1P39059 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.38□□□□□ -1.07
COL15A1P39059 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
COL15A1P39059 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
COL15A1P39059 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
COL15A1P39059 AC242426.1-201ENST00000435270 960 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 AMYP1-201ENST00000440059 1023 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 OR2L9P-201ENST00000444456 913 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 AC106800.2-201ENST00000514009 1103 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 RNA5SP418-201ENST00000515951 117 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.38□□□□□ -1.07
COL15A1P39059 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 AP002345.2-201ENST00000609961 904 ntBASIC8.38□□□□□ -1.07
COL15A1P39059 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.38□□□□□ -1.07
COL15A1P39059 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.38□□□□□ -1.07
COL15A1P39059 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.38□□□□□ -1.07
COL15A1P39059 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
COL15A1P39059 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.38□□□□□ -1.07
COL15A1P39059 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms