Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 AL138847.1-201ENST00000258651 546 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 OR10D1P-201ENST00000355343 936 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 RNU1-55P-201ENST00000365510 158 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 AP003170.5-201ENST00000397185 335 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 RNA5SP251-201ENST00000410614 137 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 RN7SKP236-201ENST00000410635 284 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 RNA5SP280-201ENST00000411230 115 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.88□□□□□ -1.47
UBCP0CG48 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 NDUFB4P1-201ENST00000462398 381 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 RN7SL143P-201ENST00000496780 297 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 AC083906.1-201ENST00000509298 406 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 RN7SKP11-201ENST00000517018 287 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.88□□□□□ -1.47
UBCP0CG48 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.88□□□□□ -1.47
UBCP0CG48 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 FRG2IP-201ENST00000563581 781 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 PRR13P3-201ENST00000603578 376 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AL049840.6-201ENST00000604583 345 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 FRG2MP-201ENST00000613317 856 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AL138960.1-201ENST00000613838 513 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AC004241.2-201ENST00000614562 444 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AL157762.1-201ENST00000619612 415 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 AC093909.6-201ENST00000624757 775 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 FKBP1AP4-201ENST00000631775 336 ntBASIC5.88□□□□□ -1.47
UBCP0CG48 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
UBCP0CG48 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.88□□□□□ -1.47
UBCP0CG48 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.88□□□□□ -1.47
UBCP0CG48 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.88□□□□□ -1.47
UBCP0CG48 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.88□□□□□ -1.47
UBCP0CG48 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBCP0CG48 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBCP0CG48 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 AC005225.5-201ENST00000623547 2225 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBCP0CG48 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBCP0CG48 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UBCP0CG48 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UBCP0CG48 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UBCP0CG48 SNORA70.3-201ENST00000365075 132 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 AL049697.3-201ENST00000406493 982 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 SNX18P13-201ENST00000412442 529 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.87□□□□□ -1.47
UBCP0CG48 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 PAICSP2-201ENST00000429118 1150 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 SUMO2P8-201ENST00000434672 286 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.87□□□□□ -1.47
UBCP0CG48 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.87□□□□□ -1.47
UBCP0CG48 RN7SL216P-201ENST00000471607 298 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.87□□□□□ -1.47
UBCP0CG48 Z99943.2-201ENST00000507585 266 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 AC017007.1-201ENST00000511960 415 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 AP001804.1-201ENST00000526868 919 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UBCP0CG48 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.87□□□□□ -1.47
UBCP0CG48 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.87□□□□□ -1.47
UBCP0CG48 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.87□□□□□ -1.47
UBCP0CG48 AC106785.4-201ENST00000569492 412 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 MIR4420-201ENST00000583944 77 ntBASIC5.87□□□□□ -1.47
UBCP0CG48 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.87□□□□□ -1.47
UBCP0CG48 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms