Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL512329.1-201ENST00000404600 1592 ntBASIC7.32□□□□□ -1.24
TPM1P09493 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.32□□□□□ -1.24
TPM1P09493 CASC19-228ENST00000641414 1684 ntBASIC7.32□□□□□ -1.24
TPM1P09493 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TPM1P09493 RNU1-55P-201ENST00000365510 158 ntBASIC7.31□□□□□ -1.24
TPM1P09493 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 CYP4F34P-201ENST00000425951 481 ntBASIC7.31□□□□□ -1.24
TPM1P09493 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 AL354714.5-201ENST00000450131 590 ntBASIC7.31□□□□□ -1.24
TPM1P09493 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.31□□□□□ -1.24
TPM1P09493 GAPDHP53-201ENST00000458397 924 ntBASIC7.31□□□□□ -1.24
TPM1P09493 AC008620.1-201ENST00000468453 592 ntBASIC7.31□□□□□ -1.24
TPM1P09493 PPP1R11P1-201ENST00000486095 376 ntBASIC7.31□□□□□ -1.24
TPM1P09493 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 OR51A1P-201ENST00000511110 946 ntBASIC7.31□□□□□ -1.24
TPM1P09493 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 SCARNA18.2-201ENST00000516882 84 ntBASIC7.31□□□□□ -1.24
TPM1P09493 RNA5SP278-201ENST00000517055 102 ntBASIC7.31□□□□□ -1.24
TPM1P09493 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.31□□□□□ -1.24
TPM1P09493 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC7.31□□□□□ -1.24
TPM1P09493 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 AC025171.4-201ENST00000607250 1047 ntBASIC7.31□□□□□ -1.24
TPM1P09493 AC012640.3-201ENST00000607847 430 ntBASIC7.31□□□□□ -1.24
TPM1P09493 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 AC016590.3-201ENST00000611171 753 ntBASIC7.31□□□□□ -1.24
TPM1P09493 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 AC026108.1-201ENST00000635444 547 ntBASIC7.31□□□□□ -1.24
TPM1P09493 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TPM1P09493 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.31□□□□□ -1.24
TPM1P09493 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 AC062022.1-201ENST00000451026 1684 ntBASIC7.31□□□□□ -1.24
TPM1P09493 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
TPM1P09493 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.31□□□□□ -1.24
TPM1P09493 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TPM1P09493 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 RACGAP1P-201ENST00000550663 1879 ntBASIC7.3□□□□□ -1.24
TPM1P09493 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
TPM1P09493 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 AL050335.1-201ENST00000396909 869 ntBASIC7.3□□□□□ -1.24
TPM1P09493 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 AC023141.1-201ENST00000419418 379 ntBASIC7.3□□□□□ -1.24
TPM1P09493 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
TPM1P09493 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 AC004692.1-201ENST00000455430 424 ntBASIC7.3□□□□□ -1.24
TPM1P09493 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 RPSAP48-201ENST00000466509 889 ntBASIC7.3□□□□□ -1.24
TPM1P09493 RN7SL165P-201ENST00000477476 291 ntBASIC7.3□□□□□ -1.24
TPM1P09493 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM1P09493 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM1P09493 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.3□□□□□ -1.24
TPM1P09493 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.3□□□□□ -1.24
TPM1P09493 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM1P09493 AC106785.4-201ENST00000569492 412 ntBASIC7.3□□□□□ -1.24
TPM1P09493 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.3□□□□□ -1.24
TPM1P09493 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM1P09493 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM1P09493 MIR3159-201ENST00000584572 74 ntBASIC7.3□□□□□ -1.24
TPM1P09493 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.3□□□□□ -1.24
TPM1P09493 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.3□□□□□ -1.24
TPM1P09493 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.3□□□□□ -1.24
TPM1P09493 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TPM1P09493 AC079753.1-201ENST00000623243 3868 ntBASIC7.29□□□□□ -1.24
TPM1P09493 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
TPM1P09493 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM1P09493 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM1P09493 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.29□□□□□ -1.24
TPM1P09493 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TPM1P09493 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM1P09493 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
TPM1P09493 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.29□□□□□ -1.24
TPM1P09493 OR10D1P-201ENST00000355343 936 ntBASIC7.29□□□□□ -1.24
TPM1P09493 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.29□□□□□ -1.24
TPM1P09493 RPL22P11-201ENST00000434894 385 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms