Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 AC105275.2-201ENST00000567907 711 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX4O60224 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 AC122710.3-201ENST00000606566 541 ntBASIC6.2□□□□□ -1.42
SSX4O60224 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.2□□□□□ -1.42
SSX4O60224 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 AL138693.1-201ENST00000622219 129 ntBASIC6.2□□□□□ -1.42
SSX4O60224 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SSX4O60224 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX4O60224 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SSX4O60224 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 AC004014.2-201ENST00000623718 5122 ntBASIC6.19□□□□□ -1.42
SSX4O60224 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 OFD1P17-201ENST00000437639 3018 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSX4O60224 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SSX4O60224 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX4O60224 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX4O60224 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 AL451136.1-201ENST00000435399 325 ntBASIC6.19□□□□□ -1.42
SSX4O60224 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 PMS2P11-201ENST00000451831 574 ntBASIC6.19□□□□□ -1.42
SSX4O60224 RN7SL849P-201ENST00000485236 295 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AC009153.1-201ENST00000485799 496 ntBASIC6.19□□□□□ -1.42
SSX4O60224 RN7SL518P-201ENST00000491887 280 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AC096661.1-201ENST00000515870 822 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX4O60224 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 MIR4800-201ENST00000537353 80 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX4O60224 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX4O60224 RN7SL426P-201ENST00000579106 295 ntBASIC6.19□□□□□ -1.42
SSX4O60224 ARGFXP2-201ENST00000579304 949 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AC011497.2-201ENST00000600255 639 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AL023806.2-201ENST00000603042 263 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AC092960.1-201ENST00000604762 351 ntBASIC6.19□□□□□ -1.42
SSX4O60224 AC027271.1-201ENST00000610270 610 ntBASIC6.19□□□□□ -1.42
SSX4O60224 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.19□□□□□ -1.42
SSX4O60224 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX4O60224 MIR665-201ENST00000635949 72 ntBASIC6.19□□□□□ -1.42
SSX4O60224 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 DDX10P2-201ENST00000417796 2614 ntBASIC6.19□□□□□ -1.42
SSX4O60224 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
SSX4O60224 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX4O60224 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX4O60224 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX4O60224 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX4O60224 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSX4O60224 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 DDX43P1-201ENST00000510713 1763 ntBASIC6.18□□□□□ -1.42
SSX4O60224 OR4G1P-202ENST00000641173 1788 ntBASIC6.18□□□□□ -1.42
SSX4O60224 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 AC006116.1-201ENST00000587908 2171 ntBASIC6.18□□□□□ -1.42
SSX4O60224 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSX4O60224 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 AP005139.1-201ENST00000580702 1647 ntBASIC6.18□□□□□ -1.42
SSX4O60224 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 RBPJP6-201ENST00000411556 1431 ntBASIC6.18□□□□□ -1.42
SSX4O60224 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX4O60224 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX4O60224 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 RN7SKP62-201ENST00000384539 329 ntBASIC6.18□□□□□ -1.42
SSX4O60224 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms