Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC102941.1-201ENST00000567616 1537 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ATP5BP1-201ENST00000411980 1574 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC130360.2-201ENST00000533477 1556 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 SNORA11D-201ENST00000408548 128 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 SNORA11E-201ENST00000408778 128 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 SNRPEP5-201ENST00000425442 278 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 MYL6P3-201ENST00000436904 432 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC114755.1-201ENST00000453101 868 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 SULT1D1P-201ENST00000458020 882 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC079193.1-201ENST00000460497 588 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SL456P-201ENST00000469290 295 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 PDCL3P1-201ENST00000534575 734 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC020914.7-201ENST00000594477 545 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AL683813.2-201ENST00000605245 502 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AL121782.1-201ENST00000611242 413 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 MIR6736-201ENST00000616799 59 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 AC007347.2-201ENST00000623044 180 ntBASIC5.9□□□□□ -1.46
RHBDD3Q9Y3P4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 RACGAP1P-201ENST00000550663 1879 ntBASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RHBDD3Q9Y3P4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 SOD1P1-201ENST00000407803 440 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SKP137-201ENST00000411074 307 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AL662791.3-201ENST00000413771 776 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AC002075.1-201ENST00000457396 676 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RPS4XP19-201ENST00000460237 736 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SL149P-201ENST00000465197 281 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LDHBP3-201ENST00000514909 822 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 IGLC4-201ENST00000517690 248 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AC004232.1-201ENST00000571388 208 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 QRSL1P3-201ENST00000552666 1316 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 Z97989.1-201ENST00000531702 2421 ntBASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDD3Q9Y3P4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDD3Q9Y3P4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms