Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 IST1-208ENST00000535424 4082 ntTSL 5 BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 RPS7P14-201ENST00000426405 583 ntBASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 HMGN1P6-201ENST00000438508 291 ntBASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 RN7SL30P-201ENST00000488416 306 ntBASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 AC010998.3-201ENST00000613871 631 ntBASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.15□□□□□ -0.79
RIMBP3Q9UFD9 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AC091544.5-201ENST00000620192 3815 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AC016583.1-201ENST00000624221 2431 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AL592429.1-201ENST00000403909 1473 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AL589647.1-201ENST00000402485 466 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AL772161.1-201ENST00000439130 476 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AC023827.2-201ENST00000566880 1061 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 AC131392.2-201ENST00000505635 4332 ntBASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
RIMBP3Q9UFD9 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 Z93929.1-201ENST00000418200 1475 ntBASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 AL603650.1-201ENST00000412680 240 ntBASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 CU639417.4-201ENST00000623928 207 ntBASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
RIMBP3Q9UFD9 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 RPL24P7-201ENST00000399435 453 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 GSTA6P-201ENST00000424144 582 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AC114755.4-201ENST00000439114 443 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 NENFP3-201ENST00000503735 313 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AL512329.2-201ENST00000607350 548 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AC092111.1-201ENST00000618256 3358 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 TRIM60P19-201ENST00000452879 1462 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 AC015871.3-201ENST00000618835 2261 ntBASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
RIMBP3Q9UFD9 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms