Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MTND3P4-201ENST00000453537 303 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 OR7E154P-201ENST00000525174 932 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 PHBP2-201ENST00000532859 806 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC069240.2-201ENST00000550242 609 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC020978.7-201ENST00000575953 1187 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 MIR4428-201ENST00000584884 73 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC011447.2-201ENST00000592921 283 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 BNIP3P35-201ENST00000604530 490 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 BX322635.1-201ENST00000605804 496 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 MIR6813-201ENST00000621638 56 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AL121949.2-201ENST00000403446 1548 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC102941.1-201ENST00000567616 1537 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AL133243.4-201ENST00000623116 3109 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 TPTE2P2-201ENST00000403471 1466 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AL512353.3-201ENST00000417517 1326 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 RNA5SP514-201ENST00000363717 111 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 RN7SKP62-201ENST00000384539 329 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 MIR187-201ENST00000385062 109 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 MTND2P15-201ENST00000418575 892 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 VN1R3-201ENST00000418822 919 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 LSM3P3-201ENST00000436601 306 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 HMGN1P6-201ENST00000438508 291 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AL513343.1-201ENST00000451818 792 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 YRDCP3-201ENST00000456507 480 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC023827.2-201ENST00000566880 1061 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC092474.3-201ENST00000603022 568 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AC016542.1-201ENST00000608259 493 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 AL590396.2-201ENST00000636511 1041 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 CDY19P-201ENST00000411668 1613 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 CDY18P-201ENST00000438294 1609 ntBASIC7.04□□□□□ -1.28
DKK3Q9UBP4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
DKK3Q9UBP4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DKK3Q9UBP4 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DKK3Q9UBP4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
DKK3Q9UBP4 SAMMSON-210ENST00000641260 1308 ntBASIC7.03□□□□□ -1.28
DKK3Q9UBP4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
DKK3Q9UBP4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
DKK3Q9UBP4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms