Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RPS14P7-201ENST00000473701 448 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 PPP1R2P6-201ENST00000478565 588 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 IGLC4-201ENST00000517690 248 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
USP35Q9P2H5 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 RPL7AP69-201ENST00000595306 806 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 RPS11-205ENST00000599561 430 ntTSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC239803.2-201ENST00000610161 430 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 MIR6862-1-201ENST00000613016 70 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 MIR6862-2-201ENST00000614755 70 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC012676.3-201ENST00000614983 479 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 AL118508.4-201ENST00000624142 1176 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 AC073857.1-201ENST00000625082 1054 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.47□□□□□ -0.89
USP35Q9P2H5 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
USP35Q9P2H5 SAMMSON-222ENST00000641901 2727 ntBASIC9.47□□□□□ -0.89
USP35Q9P2H5 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
USP35Q9P2H5 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
USP35Q9P2H5 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.46□□□□□ -0.89
USP35Q9P2H5 ASNSP6-201ENST00000592770 1618 ntBASIC9.46□□□□□ -0.89
USP35Q9P2H5 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.46□□□□□ -0.89
USP35Q9P2H5 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USP35Q9P2H5 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC010894.1-201ENST00000313760 361 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 RGS5-202ENST00000367903 934 ntTSL 3 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 RPL36P18-201ENST00000419316 318 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 NAP1L4P2-201ENST00000425958 899 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC242426.1-201ENST00000435270 960 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 CEACAMP5-201ENST00000448037 961 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 RN7SL390P-201ENST00000470634 284 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC040975.1-201ENST00000472104 316 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 RN7SL751P-201ENST00000473281 284 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 OR52A4P-202ENST00000481634 799 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 GCSHP1-201ENST00000512554 484 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 PPIAP6-201ENST00000557078 499 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC093283.1-201ENST00000565306 1075 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC023389.2-201ENST00000580031 955 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 VN1R81P-201ENST00000602085 372 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC015982.1-201ENST00000608113 465 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 RN7SL261P-201ENST00000613441 282 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 MAPK10-365ENST00000641902 3825 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC9.46□□□□□ -0.9
USP35Q9P2H5 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
USP35Q9P2H5 AP002800.1-201ENST00000624982 2225 ntBASIC9.46□□□□□ -0.9
USP35Q9P2H5 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC9.45□□□□□ -0.9
USP35Q9P2H5 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
USP35Q9P2H5 CDY11P-201ENST00000447168 1651 ntBASIC9.45□□□□□ -0.9
USP35Q9P2H5 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms