Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 CASC19-238ENST00000641523 1558 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TUBBP10-201ENST00000427668 1301 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 GTF2IP1-202ENST00000614592 2047 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RNU6-1214P-201ENST00000363650 109 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC006511.2-201ENST00000388966 660 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 MIR301B-201ENST00000390813 78 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL445213.1-201ENST00000412589 747 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RNF11P2-201ENST00000427702 440 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC090018.1-201ENST00000434369 367 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL392003.1-201ENST00000434394 243 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 UBE2D3P4-201ENST00000441973 436 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RPL34P26-201ENST00000445636 354 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL929288.2-201ENST00000446368 407 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 HMGB1P26-201ENST00000452520 628 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC114755.1-201ENST00000453101 868 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 CHIAP1-201ENST00000456220 995 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RARRES2P3-201ENST00000457739 473 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC092754.2-201ENST00000463506 460 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC008379.1-201ENST00000463655 464 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 PABPC1P10-201ENST00000464731 381 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC020779.1-201ENST00000478757 796 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC079944.1-201ENST00000485426 495 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 OR9N1P-201ENST00000491296 333 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC090543.1-201ENST00000492168 485 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 PFN1P8-201ENST00000497012 543 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC095059.2-201ENST00000510601 933 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ASNSP4-201ENST00000511103 447 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RN7SKP2-201ENST00000517003 319 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 IGKV3D-31-201ENST00000519131 281 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 OR56A7P-201ENST00000524865 941 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 SDHCP4-201ENST00000532834 510 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC093014.1-201ENST00000548926 724 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 MIR4786-201ENST00000583954 80 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RPS28P1-201ENST00000604589 187 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL096855.2-201ENST00000605785 369 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 OR2AS2P-201ENST00000606902 342 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL391903.2-201ENST00000614532 247 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AL121890.3-201ENST00000618494 516 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC104454.1-201ENST00000421341 1401 ntBASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 AP003175.1-201ENST00000641383 6658 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 VEZF1P1-201ENST00000423931 1541 ntBASIC6.31□□□□□ -1.4
SSBP3Q9BWW4 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms