Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC244502.2-201ENST00000543361 851 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC095057.3-201ENST00000567102 1157 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 RN7SL715P-201ENST00000606972 286 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC109454.4-201ENST00000623411 649 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AP003485.2-201ENST00000623636 610 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC145207.9-201ENST00000623802 325 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 AP003471.1-202ENST00000319051 1988 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 CCDC162P-202ENST00000368966 6751 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 IMMTP1-201ENST00000435590 2219 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 CTAGE3P-201ENST00000454280 2404 ntBASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.49□□□□□ -1.05
TRAIPQ9BWF2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RNU6-1320P-201ENST00000390838 107 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RNU6-1269P-201ENST00000391139 107 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 H2AFZP3-201ENST00000394213 387 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 FCF1P5-201ENST00000406490 482 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC003071.2-201ENST00000423857 315 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL161454.1-201ENST00000446226 569 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RPS6P2-201ENST00000454208 705 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 OR2AF1P-201ENST00000454899 889 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RNU6-599P-201ENST00000459383 107 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RNU6-1193P-201ENST00000459461 107 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC087672.1-201ENST00000479876 766 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC104687.1-201ENST00000485829 412 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC061975.8-201ENST00000587058 721 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL031429.2-201ENST00000602605 649 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL035411.2-201ENST00000604022 421 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RNU6-368P-201ENST00000620928 107 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 RNU6-538P-201ENST00000622329 107 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL353898.2-201ENST00000623000 255 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC004777.1-201ENST00000624317 287 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 OR1S1-201ENST00000624470 978 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 MAPK10-347ENST00000641762 2856 ntBASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
TRAIPQ9BWF2 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AL023806.3-201ENST00000638502 2704 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AL121950.1-201ENST00000624993 2077 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms