Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 HCG18-244ENST00000602516 2890 ntBASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
COL22A1Q8NFW1 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AL354890.1-201ENST00000413730 346 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 SDHDP6-201ENST00000414693 480 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC093155.2-201ENST00000420734 937 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC079600.1-201ENST00000550326 297 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 BUB1P1-201ENST00000603541 607 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 UGT2B25P-201ENST00000511504 1586 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC023818.2-201ENST00000623817 2304 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 RNA5SP443-201ENST00000363083 132 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC245452.2-201ENST00000435222 392 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 PFN1P6-201ENST00000476786 399 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC022415.1-202ENST00000486612 523 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 ZNF322P1-201ENST00000568013 1209 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 MIR6793-201ENST00000612376 63 ntBASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
COL22A1Q8NFW1 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 SNORA21-201ENST00000362423 132 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AL163193.1-201ENST00000444895 788 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 HIGD1AP16-201ENST00000450986 258 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 RPL32P9-201ENST00000487963 407 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 MIR1273E-201ENST00000581165 102 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AC010327.2-201ENST00000587647 488 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 AC130456.6-201ENST00000623745 765 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 RBPJP7-201ENST00000442803 1447 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 RBPJP5-201ENST00000449433 1447 ntBASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
COL22A1Q8NFW1 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL22A1Q8NFW1 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms