Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC093909.6-201ENST00000624757 775 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 AC087392.3-202ENST00000358446 1754 ntBASIC7.08□□□□□ -1.28
CCDC50Q8IVM0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 IMMTP1-201ENST00000435590 2219 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC025809.2-201ENST00000625085 1802 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 OR2M1P-201ENST00000318104 951 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 PPIAP26-201ENST00000377951 522 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AP003170.5-201ENST00000397185 335 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 RN7SKP188-201ENST00000410789 317 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 SNRPEP5-201ENST00000425442 278 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 RPL34P27-201ENST00000428810 349 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 MED28P7-201ENST00000456611 530 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 H3F3AP3-201ENST00000497682 407 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AP000662.1-201ENST00000530952 487 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 SSU72P6-201ENST00000532644 488 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AP006587.6-201ENST00000582128 1091 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 EXOSC3P2-201ENST00000594464 497 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AL953862.2-201ENST00000603089 820 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AL359704.2-201ENST00000604335 521 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 AP001153.1-201ENST00000641024 338 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 RACGAP1P-201ENST00000550663 1879 ntBASIC7.07□□□□□ -1.28
CCDC50Q8IVM0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 Z97989.1-201ENST00000531702 2421 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC004014.2-201ENST00000623718 5122 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 NPM1P31-201ENST00000399021 764 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AL663061.1-201ENST00000416625 580 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC239367.3-201ENST00000428996 814 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC245452.2-201ENST00000435222 392 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC009518.3-201ENST00000438972 253 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 BX005266.3-201ENST00000443013 1075 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 RPS26P11-201ENST00000463445 348 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 RPS26P6-201ENST00000475156 348 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 PPP1R11P1-201ENST00000486095 376 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 RN7SL143P-201ENST00000496780 297 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AL135933.1-201ENST00000498657 802 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms