Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL356585.10-201ENST00000641883 123 ntBASIC7.42□□□□□ -1.22
TPM4P67936 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TPM4P67936 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.42□□□□□ -1.22
TPM4P67936 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.42□□□□□ -1.22
TPM4P67936 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TPM4P67936 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TPM4P67936 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TPM4P67936 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
TPM4P67936 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.42□□□□□ -1.22
TPM4P67936 PWRN1-212ENST00000569908 1435 ntBASIC7.42□□□□□ -1.22
TPM4P67936 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TPM4P67936 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TPM4P67936 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM4P67936 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TPM4P67936 AC079753.1-201ENST00000623243 3868 ntBASIC7.41□□□□□ -1.22
TPM4P67936 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TPM4P67936 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM4P67936 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TPM4P67936 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
TPM4P67936 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM4P67936 RPS17P17-201ENST00000419392 409 ntBASIC7.41□□□□□ -1.22
TPM4P67936 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM4P67936 AC092066.1-201ENST00000425131 317 ntBASIC7.41□□□□□ -1.22
TPM4P67936 CYP4F34P-201ENST00000425951 481 ntBASIC7.41□□□□□ -1.22
TPM4P67936 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.41□□□□□ -1.22
TPM4P67936 DNAJC19P5-201ENST00000443295 316 ntBASIC7.41□□□□□ -1.22
TPM4P67936 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM4P67936 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM4P67936 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 RPL23AP68-201ENST00000480924 445 ntBASIC7.41□□□□□ -1.22
TPM4P67936 RN7SL647P-201ENST00000485429 300 ntBASIC7.41□□□□□ -1.22
TPM4P67936 AC021146.11-201ENST00000503319 491 ntBASIC7.41□□□□□ -1.22
TPM4P67936 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TPM4P67936 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 RN7SKP67-201ENST00000515905 235 ntBASIC7.41□□□□□ -1.22
TPM4P67936 SCARNA18.2-201ENST00000516882 84 ntBASIC7.41□□□□□ -1.22
TPM4P67936 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.41□□□□□ -1.22
TPM4P67936 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.41□□□□□ -1.22
TPM4P67936 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 AC005495.1-201ENST00000586611 1211 ntBASIC7.41□□□□□ -1.22
TPM4P67936 U1.41-201ENST00000617626 165 ntBASIC7.41□□□□□ -1.22
TPM4P67936 AC005225.5-201ENST00000623547 2225 ntBASIC7.41□□□□□ -1.22
TPM4P67936 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.41□□□□□ -1.22
TPM4P67936 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM4P67936 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
TPM4P67936 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM4P67936 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM4P67936 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM4P67936 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
TPM4P67936 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TPM4P67936 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM4P67936 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.4□□□□□ -1.22
TPM4P67936 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
TPM4P67936 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
TPM4P67936 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM4P67936 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TPM4P67936 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 AL035467.1-201ENST00000403583 686 ntBASIC7.4□□□□□ -1.22
TPM4P67936 RNA5SP251-201ENST00000410614 137 ntBASIC7.4□□□□□ -1.22
TPM4P67936 RN7SKP296-201ENST00000411185 341 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AC116036.1-201ENST00000412199 367 ntBASIC7.4□□□□□ -1.22
TPM4P67936 RPS7P12-201ENST00000422385 582 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AC093107.1-201ENST00000422772 609 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AC097721.1-201ENST00000427150 1253 ntBASIC7.4□□□□□ -1.22
TPM4P67936 PRPS1P2-201ENST00000430496 937 ntBASIC7.4□□□□□ -1.22
TPM4P67936 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM4P67936 SCDP1-201ENST00000455244 1081 ntBASIC7.4□□□□□ -1.22
TPM4P67936 RPSAP48-201ENST00000466509 889 ntBASIC7.4□□□□□ -1.22
TPM4P67936 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM4P67936 DCAF13P2-201ENST00000514188 555 ntBASIC7.4□□□□□ -1.22
TPM4P67936 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM4P67936 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM4P67936 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
TPM4P67936 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TPM4P67936 SNRPCP20-201ENST00000588011 210 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TPM4P67936 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM4P67936 AC012640.3-201ENST00000607847 430 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AC073263.3-201ENST00000624449 858 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AC093909.6-201ENST00000624757 775 ntBASIC7.4□□□□□ -1.22
TPM4P67936 AL121936.2-201ENST00000641935 662 ntBASIC7.4□□□□□ -1.22
TPM4P67936 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.4□□□□□ -1.22
TPM4P67936 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM4P67936 AC089998.1-201ENST00000548575 3141 ntBASIC7.4□□□□□ -1.23
TPM4P67936 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
TPM4P67936 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM4P67936 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM4P67936 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms