Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH13P55290 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH13P55290 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH13P55290 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 AC006213.6-201ENST00000623722 4179 ntBASIC6.54□□□□□ -1.36
CDH13P55290 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 ZNF658B-201ENST00000602828 3408 ntBASIC6.54□□□□□ -1.36
CDH13P55290 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.54□□□□□ -1.36
CDH13P55290 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH13P55290 RNA5SP333-201ENST00000363466 118 ntBASIC6.54□□□□□ -1.36
CDH13P55290 RNA5SP334-201ENST00000364825 118 ntBASIC6.54□□□□□ -1.36
CDH13P55290 RNU1-55P-201ENST00000365510 158 ntBASIC6.54□□□□□ -1.36
CDH13P55290 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH13P55290 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH13P55290 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH13P55290 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH13P55290 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH13P55290 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH13P55290 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH13P55290 PAICSP2-201ENST00000429118 1150 ntBASIC6.54□□□□□ -1.36
CDH13P55290 NFYAP1-201ENST00000431953 972 ntBASIC6.54□□□□□ -1.36
CDH13P55290 AC114402.2-201ENST00000432760 643 ntBASIC6.54□□□□□ -1.36
CDH13P55290 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.54□□□□□ -1.36
CDH13P55290 CR391992.1-201ENST00000438601 394 ntBASIC6.54□□□□□ -1.36
CDH13P55290 MTCO3P17-201ENST00000443775 513 ntBASIC6.54□□□□□ -1.36
CDH13P55290 AL353803.3-201ENST00000444641 335 ntBASIC6.54□□□□□ -1.36
CDH13P55290 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 RN7SL456P-201ENST00000469290 295 ntBASIC6.54□□□□□ -1.36
CDH13P55290 AC126615.1-201ENST00000470084 630 ntBASIC6.54□□□□□ -1.36
CDH13P55290 RNA5SP116-201ENST00000516132 98 ntBASIC6.54□□□□□ -1.36
CDH13P55290 IGHV3-57-201ENST00000520143 280 ntBASIC6.54□□□□□ -1.36
CDH13P55290 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDH13P55290 PHBP2-201ENST00000532859 806 ntBASIC6.54□□□□□ -1.36
CDH13P55290 AL132640.1-201ENST00000559594 619 ntBASIC6.54□□□□□ -1.36
CDH13P55290 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.54□□□□□ -1.36
CDH13P55290 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 SETP3-201ENST00000581726 813 ntBASIC6.54□□□□□ -1.36
CDH13P55290 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.54□□□□□ -1.36
CDH13P55290 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH13P55290 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
CDH13P55290 OR4G1P-202ENST00000641173 1788 ntBASIC6.54□□□□□ -1.36
CDH13P55290 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CDH13P55290 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 AP002370.1-201ENST00000528055 1602 ntBASIC6.54□□□□□ -1.36
CDH13P55290 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDH13P55290 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.54□□□□□ -1.36
CDH13P55290 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 AC007114.2-201ENST00000576014 4281 ntBASIC6.53□□□□□ -1.36
CDH13P55290 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 OR10D1P-201ENST00000355343 936 ntBASIC6.53□□□□□ -1.36
CDH13P55290 SNORA11D-201ENST00000408548 128 ntBASIC6.53□□□□□ -1.36
CDH13P55290 SNORA11E-201ENST00000408778 128 ntBASIC6.53□□□□□ -1.36
CDH13P55290 RN7SKP39-201ENST00000410773 322 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AL662791.3-201ENST00000413771 776 ntBASIC6.53□□□□□ -1.36
CDH13P55290 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH13P55290 GAPDHP57-201ENST00000424400 585 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AL139415.1-201ENST00000424862 352 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 AL590128.1-201ENST00000433407 286 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.53□□□□□ -1.36
CDH13P55290 PCMTD1P3-201ENST00000451824 472 ntBASIC6.53□□□□□ -1.36
CDH13P55290 RPS26P11-201ENST00000463445 348 ntBASIC6.53□□□□□ -1.36
CDH13P55290 RPS26P6-201ENST00000475156 348 ntBASIC6.53□□□□□ -1.36
CDH13P55290 RPL23AP68-201ENST00000480924 445 ntBASIC6.53□□□□□ -1.36
CDH13P55290 LDHAP1-201ENST00000509421 992 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AC017007.1-201ENST00000511960 415 ntBASIC6.53□□□□□ -1.36
CDH13P55290 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH13P55290 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH13P55290 PDCL3P1-201ENST00000534575 734 ntBASIC6.53□□□□□ -1.36
CDH13P55290 MIR4800-201ENST00000537353 80 ntBASIC6.53□□□□□ -1.36
CDH13P55290 VDAC2P2-201ENST00000544463 901 ntBASIC6.53□□□□□ -1.36
CDH13P55290 RPL41P2-201ENST00000544920 409 ntBASIC6.53□□□□□ -1.36
CDH13P55290 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH13P55290 NF1P12-201ENST00000549593 583 ntBASIC6.53□□□□□ -1.36
CDH13P55290 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH13P55290 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms