Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RN7SL254P-201ENST00000460609 284 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 GM2AP2-201ENST00000491764 562 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 AP003115.1-201ENST00000569849 463 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.43□□□□□ -1.06
COL15A1P39059 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
COL15A1P39059 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
COL15A1P39059 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
COL15A1P39059 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
COL15A1P39059 BRD7P1-201ENST00000557705 1915 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
COL15A1P39059 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.42□□□□□ -1.06
COL15A1P39059 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.42□□□□□ -1.06
COL15A1P39059 OSTCP4-201ENST00000424397 449 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 AC239367.3-201ENST00000428996 814 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 RPSAP41-201ENST00000439695 860 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 PMS2P9-201ENST00000441237 515 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.42□□□□□ -1.06
COL15A1P39059 GAPDHP16-201ENST00000448152 962 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 RN7SL834P-201ENST00000461450 286 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
COL15A1P39059 CYCSP25-201ENST00000525280 316 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.42□□□□□ -1.06
COL15A1P39059 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 AC004232.1-201ENST00000571388 208 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 RN7SL366P-201ENST00000577957 292 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 AL589863.1-201ENST00000595383 631 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 AP000577.1-201ENST00000624366 878 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 AC008691.1-209ENST00000642094 814 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
COL15A1P39059 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
COL15A1P39059 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
COL15A1P39059 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.42□□□□□ -1.06
COL15A1P39059 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
COL15A1P39059 AC125603.4-201ENST00000621942 2699 ntBASIC8.42□□□□□ -1.06
COL15A1P39059 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.41□□□□□ -1.06
COL15A1P39059 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 SMG1P5-202ENST00000529428 4219 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 SMG1P2-201ENST00000566127 4221 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 AKAP17BP-201ENST00000431706 2719 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.41□□□□□ -1.06
COL15A1P39059 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.41□□□□□ -1.06
COL15A1P39059 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC8.41□□□□□ -1.06
COL15A1P39059 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.41□□□□□ -1.06
COL15A1P39059 RPL21P50-201ENST00000417698 477 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 AC009500.1-201ENST00000420684 583 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.41□□□□□ -1.06
COL15A1P39059 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 OR2AF1P-201ENST00000454899 889 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 RN7SL382P-201ENST00000482631 282 ntBASIC8.41□□□□□ -1.06
COL15A1P39059 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.41□□□□□ -1.06
COL15A1P39059 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.41□□□□□ -1.06
COL15A1P39059 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
COL15A1P39059 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.41□□□□□ -1.06
COL15A1P39059 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
COL15A1P39059 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 AL136981.1-203ENST00000451452 3844 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 AC011379.1-201ENST00000508713 3025 ntBASIC8.4□□□□□ -1.06
COL15A1P39059 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
COL15A1P39059 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
COL15A1P39059 RPL5P20-201ENST00000403848 896 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms