Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM1P09493 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
TPM1P09493 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.34□□□□□ -1.24
TPM1P09493 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
TPM1P09493 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
TPM1P09493 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM1P09493 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
TPM1P09493 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 RNA5SP350-201ENST00000363298 111 ntBASIC7.33□□□□□ -1.24
TPM1P09493 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM1P09493 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 RNU1-46P-201ENST00000384425 164 ntBASIC7.33□□□□□ -1.24
TPM1P09493 TYMSP1-201ENST00000407851 869 ntBASIC7.33□□□□□ -1.24
TPM1P09493 AC093107.1-201ENST00000422772 609 ntBASIC7.33□□□□□ -1.24
TPM1P09493 GAPDHP57-201ENST00000424400 585 ntBASIC7.33□□□□□ -1.24
TPM1P09493 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 PAICSP2-201ENST00000429118 1150 ntBASIC7.33□□□□□ -1.24
TPM1P09493 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.33□□□□□ -1.24
TPM1P09493 FTLP17-201ENST00000432567 525 ntBASIC7.33□□□□□ -1.24
TPM1P09493 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM1P09493 RPS26P11-201ENST00000463445 348 ntBASIC7.33□□□□□ -1.24
TPM1P09493 RN7SL149P-201ENST00000465197 281 ntBASIC7.33□□□□□ -1.24
TPM1P09493 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 RPS26P6-201ENST00000475156 348 ntBASIC7.33□□□□□ -1.24
TPM1P09493 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM1P09493 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM1P09493 TECRP2-201ENST00000503270 928 ntBASIC7.33□□□□□ -1.24
TPM1P09493 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 IGHV1-14-201ENST00000523391 241 ntBASIC7.33□□□□□ -1.24
TPM1P09493 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM1P09493 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.33□□□□□ -1.24
TPM1P09493 OR5M4P-201ENST00000529436 925 ntBASIC7.33□□□□□ -1.24
TPM1P09493 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.33□□□□□ -1.24
TPM1P09493 BMS1P8-201ENST00000565049 1178 ntBASIC7.33□□□□□ -1.24
TPM1P09493 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
TPM1P09493 EIF4A3P1-201ENST00000578499 647 ntBASIC7.33□□□□□ -1.24
TPM1P09493 AC011447.2-201ENST00000592921 283 ntBASIC7.33□□□□□ -1.24
TPM1P09493 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.33□□□□□ -1.24
TPM1P09493 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM1P09493 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 AL035410.2-201ENST00000604963 864 ntBASIC7.33□□□□□ -1.24
TPM1P09493 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM1P09493 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TPM1P09493 MAPK10-287ENST00000641217 3037 ntBASIC7.33□□□□□ -1.24
TPM1P09493 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM1P09493 AC063923.1-201ENST00000478982 1619 ntBASIC7.33□□□□□ -1.24
TPM1P09493 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TPM1P09493 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM1P09493 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM1P09493 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
TPM1P09493 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TPM1P09493 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 SNORD8-201ENST00000363915 110 ntBASIC7.32□□□□□ -1.24
TPM1P09493 RN7SKP237-201ENST00000364663 301 ntBASIC7.32□□□□□ -1.24
TPM1P09493 RNA5SP442-201ENST00000365050 107 ntBASIC7.32□□□□□ -1.24
TPM1P09493 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.32□□□□□ -1.24
TPM1P09493 GAPDHP69-201ENST00000425504 1008 ntBASIC7.32□□□□□ -1.24
TPM1P09493 Z68868.1-201ENST00000429048 544 ntBASIC7.32□□□□□ -1.24
TPM1P09493 AL645936.2-201ENST00000430565 928 ntBASIC7.32□□□□□ -1.24
TPM1P09493 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM1P09493 RN7SL216P-201ENST00000471607 298 ntBASIC7.32□□□□□ -1.24
TPM1P09493 IGLC4-201ENST00000517690 248 ntBASIC7.32□□□□□ -1.24
TPM1P09493 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.32□□□□□ -1.24
TPM1P09493 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.32□□□□□ -1.24
TPM1P09493 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.32□□□□□ -1.24
TPM1P09493 MIR4786-201ENST00000583954 80 ntBASIC7.32□□□□□ -1.24
TPM1P09493 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 AC093909.6-201ENST00000624757 775 ntBASIC7.32□□□□□ -1.24
TPM1P09493 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.32□□□□□ -1.24
TPM1P09493 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.32□□□□□ -1.24
TPM1P09493 OR5AU1-204ENST00000641822 1197 ntBASIC7.32□□□□□ -1.24
TPM1P09493 AL356585.10-201ENST00000641883 123 ntBASIC7.32□□□□□ -1.24
TPM1P09493 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TPM1P09493 AC005332.9-201ENST00000620266 2921 ntBASIC7.32□□□□□ -1.24
TPM1P09493 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms