Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC062022.1-201ENST00000451026 1684 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 RN7SKP211-201ENST00000363328 315 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 RNU1-46P-201ENST00000384425 164 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DQA1P01909 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 RPSAP24-201ENST00000461543 873 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 RPL34P22-201ENST00000468193 318 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DQA1P01909 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 ADI1P2-201ENST00000514945 429 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 RNA5SP278-201ENST00000517055 102 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 OR7E1P-201ENST00000533891 958 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC133569.1-201ENST00000564327 373 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DQA1P01909 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 RPSAP66-201ENST00000592196 606 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 uc_338.33-201ENST00000614988 170 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 Xist_exon4.1-201ENST00000615964 126 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 AC010320.5-201ENST00000619124 676 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 AL139254.2-202ENST00000641937 1156 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DQA1P01909 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DQA1P01909 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HLA-DQA1P01909 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC010624.4-201ENST00000597606 1351 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC232271.1-201ENST00000602455 2715 ntBASIC5□□□□□ -1.61
HLA-DQA1P01909 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DQA1P01909 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DQA1P01909 Z97989.1-201ENST00000531702 2421 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 SAMMSON-203ENST00000641005 2168 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC106872.6-201ENST00000514228 1346 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC011815.2-201ENST00000618230 2021 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC011455.2-201ENST00000599320 3336 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC140134.1-201ENST00000511830 3544 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC004014.2-201ENST00000623718 5122 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 SNORA73B-201ENST00000363217 204 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 RPL12P1-201ENST00000374520 498 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL023284.3-201ENST00000407767 334 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL357632.1-201ENST00000426688 643 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 SNX18P14-201ENST00000429308 574 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 PRPS1P2-201ENST00000430496 937 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 LSM3P3-201ENST00000436601 306 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 BX005266.3-201ENST00000443013 1075 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 RN7SL213P-201ENST00000463482 317 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 RN7SL314P-201ENST00000490735 292 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AP006437.1-202ENST00000530327 933 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 DCN-207ENST00000546370 586 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms