Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC187A0A096LP49 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 MT-RNR1-201ENST00000389680 954 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 RPL24P7-201ENST00000399435 453 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC009500.1-201ENST00000420684 583 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 VN1R53P-201ENST00000429536 957 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 NPM1P48-201ENST00000436002 853 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC234771.2-201ENST00000445718 597 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC007383.1-201ENST00000445875 636 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 CCNJP1-201ENST00000450600 1149 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 PGBD4P1-201ENST00000473644 407 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC066616.1-201ENST00000486795 413 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 RNA5SP278-201ENST00000517055 102 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC120036.3-201ENST00000517826 292 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC087752.2-201ENST00000521219 281 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 SALL4P7-201ENST00000555779 3120 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC061975.7-201ENST00000592016 2692 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC012175.1-201ENST00000603755 531 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC130448.2-201ENST00000624082 374 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC020978.9-201ENST00000624380 1141 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AL138960.2-201ENST00000625145 535 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AC004808.2-201ENST00000627965 773 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.63□□□□□ -1.35
CCDC187A0A096LP49 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AL358913.2-201ENST00000553881 1548 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AC010132.4-201ENST00000569883 1368 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 RNU6-819P-201ENST00000364116 107 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AL356806.1-201ENST00000422524 916 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 RPL12P11-201ENST00000439970 501 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 NUCKS1P1-201ENST00000452067 703 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AKR1D1P1-201ENST00000457236 936 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 CTSLP6-201ENST00000458273 1002 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 RPL37P23-201ENST00000492641 294 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 SNORA70.17-201ENST00000516449 133 ntBASIC6.62□□□□□ -1.35
CCDC187A0A096LP49 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms