Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL139407.1-201ENST00000613826 1175 ntBASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RIMBP3Q9UFD9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 SAGE3P-201ENST00000619800 1635 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AL132875.1-201ENST00000403623 949 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AL596448.1-201ENST00000415024 392 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 RPL26P29-201ENST00000415623 438 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AC021220.1-201ENST00000507445 630 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 IGKV3D-31-201ENST00000519131 281 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 OR4A21P-201ENST00000532759 944 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 STARD6-202ENST00000577499 696 ntTSL 2 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AL049840.5-201ENST00000602827 552 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AC025162.2-201ENST00000619602 560 ntBASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RIMBP3Q9UFD9 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 ANKRD20A11P-206ENST00000451663 3717 ntBASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC068733.1-202ENST00000531479 2456 ntBASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 WDR95P-201ENST00000425638 1542 ntBASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC253576.1-201ENST00000511645 1156 ntBASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 THAP12P7-201ENST00000520248 2290 ntBASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RIMBP3Q9UFD9 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 RPL35AP24-201ENST00000413846 330 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 PIP5K1P2-201ENST00000437005 1120 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 AP005597.2-201ENST00000526238 341 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 MIR4330-201ENST00000579077 105 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 AL356986.1-201ENST00000604085 341 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 AC245389.2-201ENST00000616023 576 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 AC242843.1-201ENST00000618702 573 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 AP000577.1-201ENST00000624366 878 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 OR52B5P-204ENST00000641744 3467 ntBASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RIMBP3Q9UFD9 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms