Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC089984.3-201ENST00000552838 363 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 MIR4428-201ENST00000584884 73 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC022001.1-201ENST00000605193 268 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC016957.2-201ENST00000616998 848 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC073857.1-201ENST00000625082 1054 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 MFSD8-217ENST00000641178 4374 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC012321.1-201ENST00000561622 1588 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 HSPA8P19-201ENST00000505359 1517 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AL050305.1-201ENST00000399993 1230 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 RPS3AP25-201ENST00000411660 793 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 RPL6P21-201ENST00000418672 846 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC018804.1-201ENST00000430381 618 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 MYO5BP3-201ENST00000431872 1279 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 LSM3P3-201ENST00000436601 306 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC131233.1-201ENST00000479200 955 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AL158068.1-201ENST00000506116 616 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 SSX8-201ENST00000506270 579 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 OR10J9P-201ENST00000511932 987 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AP005902.2-201ENST00000518393 307 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 CIR1P1-201ENST00000524055 1133 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC007537.1-201ENST00000539347 327 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 MIR744-201ENST00000578242 98 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AC009974.1-201ENST00000608881 455 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AL512506.1-201ENST00000613918 449 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 AP005212.3-201ENST00000619964 528 ntBASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDK5RAP1Q96SZ6 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.27□□□□□ -1.24
CDK5RAP1Q96SZ6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CDK5RAP1Q96SZ6 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CDK5RAP1Q96SZ6 AL121949.2-201ENST00000403446 1548 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 OR2AH1P-202ENST00000641232 2744 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 RN7SKP189-201ENST00000365042 330 ntBASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CDK5RAP1Q96SZ6 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms