Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RPL34P29-201ENST00000491411 325 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 IGLV3-6-201ENST00000523937 250 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC007537.1-201ENST00000539347 327 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL139123.1-201ENST00000612008 430 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AL157831.2-201ENST00000564681 3095 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 RN7SKP237-201ENST00000364663 301 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AL359715.1-201ENST00000404330 555 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 EIF4A1P13-201ENST00000415667 230 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 VDAC1P10-201ENST00000416715 891 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 CHCHD3P1-201ENST00000425516 676 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 BX679664.2-201ENST00000439282 283 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 RN7SL213P-201ENST00000463482 317 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 RN7SL165P-201ENST00000477476 291 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 CHCHD2P7-201ENST00000508008 452 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 IGKV2-19-201ENST00000518132 283 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC012653.2-201ENST00000621880 420 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC020658.2-201ENST00000559030 4020 ntBASIC5.72□□□□□ -1.49
BEST4Q8NFU0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BEST4Q8NFU0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
BEST4Q8NFU0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
BEST4Q8NFU0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
BEST4Q8NFU0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
BEST4Q8NFU0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
BEST4Q8NFU0 AC005725.1-201ENST00000577346 2607 ntBASIC5.71□□□□□ -1.5
BEST4Q8NFU0 AC009831.5-201ENST00000624000 3189 ntBASIC5.71□□□□□ -1.5
BEST4Q8NFU0 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 NPM1P14-201ENST00000343743 866 ntBASIC5.71□□□□□ -1.5
BEST4Q8NFU0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 IFNA12P-201ENST00000413147 571 ntBASIC5.71□□□□□ -1.5
BEST4Q8NFU0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.71□□□□□ -1.5
BEST4Q8NFU0 RPS17P17-201ENST00000419392 409 ntBASIC5.71□□□□□ -1.5
BEST4Q8NFU0 RPSAP59-201ENST00000421048 890 ntBASIC5.71□□□□□ -1.5
BEST4Q8NFU0 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms