Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 RNA5SP308-201ENST00000362532 115 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 MIR191-201ENST00000384873 92 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 GAPDHP57-201ENST00000424400 585 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 GAPDHP19-201ENST00000431768 1005 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AL031681.1-201ENST00000443304 400 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 DEFA11P-201ENST00000446470 261 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 RPL23AP28-201ENST00000448062 470 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 RN7SL216P-201ENST00000471607 298 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 RPS14P8-201ENST00000478778 369 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 RNA5SP116-201ENST00000516132 98 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 SETP3-201ENST00000581726 813 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC005514.1-201ENST00000623521 208 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AC027559.1-201ENST00000636288 271 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 FANCD2P2-201ENST00000437591 1400 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 MAPK10-379ENST00000642013 1385 ntBASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
H3F3CQ6NXT2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AL590635.1-201ENST00000406314 586 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 RN7SKP146-201ENST00000410242 334 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC008753.1-201ENST00000423096 284 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 NPM1P25-201ENST00000429734 854 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC245047.1-201ENST00000433276 873 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AL590128.1-201ENST00000433407 286 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AKR1D1P1-201ENST00000457236 936 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC099340.1-201ENST00000475247 599 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 RN7SL37P-201ENST00000490461 307 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 MIR6503-201ENST00000622884 86 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC006328.2-201ENST00000623198 397 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC012005.2-201ENST00000624333 397 ntBASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H3F3CQ6NXT2 AC010132.4-201ENST00000569883 1368 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms