Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC108451.2-201ENST00000603875 538 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AC005070.2-201ENST00000604391 260 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AP004372.1-201ENST00000604842 844 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 U47924.1-201ENST00000606539 434 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC012640.3-201ENST00000607847 430 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AP000864.1-201ENST00000609424 650 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 AL161931.1-201ENST00000612768 246 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AC019080.5-201ENST00000624891 757 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AP003485.1-201ENST00000625093 753 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 OR4G3P-201ENST00000633500 913 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 AC073488.7-201ENST00000633785 778 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 OR5AC4P-202ENST00000642086 985 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 LCOR-201ENST00000286067 4542 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 AL391380.1-201ENST00000439300 1432 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
NKX6-1P78426 AL353795.1-201ENST00000439134 1775 ntBASIC6.49□□□□□ -1.37
NKX6-1P78426 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NKX6-1P78426 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.49□□□□□ -1.37
NKX6-1P78426 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NKX6-1P78426 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NKX6-1P78426 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.48□□□□□ -1.37
NKX6-1P78426 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NKX6-1P78426 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NKX6-1P78426 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NKX6-1P78426 RN7SKP63-201ENST00000363187 301 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 U3.14-201ENST00000365363 227 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 MIR498-201ENST00000385134 124 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 RN7SKP221-201ENST00000410420 301 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 RN7SKP131-201ENST00000410698 301 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 RNU2-18P-201ENST00000411224 162 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL606517.1-201ENST00000446914 387 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 RPLP0P1-201ENST00000457002 361 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.48□□□□□ -1.37
NKX6-1P78426 CBX5P1-201ENST00000468470 561 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.48□□□□□ -1.37
NKX6-1P78426 NAMPTP2-201ENST00000505629 1115 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC068631.3-201ENST00000538831 225 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.48□□□□□ -1.37
NKX6-1P78426 DPPA3P2-202ENST00000557188 1219 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AC040162.2-201ENST00000573092 157 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.48□□□□□ -1.37
NKX6-1P78426 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC112503.2-201ENST00000609005 552 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 AL592494.3-201ENST00000609485 464 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 AL050303.3-201ENST00000613704 284 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NKX6-1P78426 AC010608.3-201ENST00000625048 527 ntBASIC6.48□□□□□ -1.37
NKX6-1P78426 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms