Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR5D2P-201ENST00000524390 911 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC130364.2-201ENST00000528639 604 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
RHBDL3P58872 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RHBDL3P58872 AC087575.1-201ENST00000585087 229 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC012175.1-201ENST00000603755 531 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC087269.2-201ENST00000641764 975 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.05□□□□□ -1.12
RHBDL3P58872 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
RHBDL3P58872 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.05□□□□□ -1.12
RHBDL3P58872 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
RHBDL3P58872 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.04□□□□□ -1.12
RHBDL3P58872 PSMC1P4-201ENST00000515236 1327 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RHBDL3P58872 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.04□□□□□ -1.12
RHBDL3P58872 LINC02035-201ENST00000610128 5476 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RHBDL3P58872 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
RHBDL3P58872 ICE2P1-201ENST00000512800 1849 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC073342.2-201ENST00000595842 1800 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 RPL12P13-201ENST00000310055 497 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 RNU1-55P-201ENST00000365510 158 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 U3.52-201ENST00000384034 216 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 ZNF736P10Y-201ENST00000403990 1110 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC017035.1-201ENST00000411999 1115 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 HMGB1P32-201ENST00000425971 565 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.04□□□□□ -1.12
RHBDL3P58872 UBBP5-201ENST00000446970 266 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 RN7SL168P-201ENST00000463821 279 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 PABPC1P1-201ENST00000506347 591 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.04□□□□□ -1.12
RHBDL3P58872 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.04□□□□□ -1.12
RHBDL3P58872 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.04□□□□□ -1.12
RHBDL3P58872 OR4A41P-201ENST00000533053 928 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC016144.1-201ENST00000548175 1087 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 EIF1AXP2-201ENST00000555940 413 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.04□□□□□ -1.12
RHBDL3P58872 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.04□□□□□ -1.12
RHBDL3P58872 AC114477.1-201ENST00000605097 605 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 SNORD96A-201ENST00000606577 79 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC026951.2-201ENST00000613847 241 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 AC012676.3-201ENST00000614983 479 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 AC007342.9-201ENST00000623877 1385 ntBASIC8.04□□□□□ -1.12
RHBDL3P58872 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RHBDL3P58872 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RHBDL3P58872 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.04□□□□□ -1.12
RHBDL3P58872 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.03□□□□□ -1.12
RHBDL3P58872 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.03□□□□□ -1.12
RHBDL3P58872 AL353763.1-201ENST00000624467 1628 ntBASIC8.03□□□□□ -1.12
RHBDL3P58872 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
RHBDL3P58872 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 Z97989.1-201ENST00000531702 2421 ntBASIC8.03□□□□□ -1.12
RHBDL3P58872 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.03□□□□□ -1.12
RHBDL3P58872 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.03□□□□□ -1.12
RHBDL3P58872 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.03□□□□□ -1.12
RHBDL3P58872 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RHBDL3P58872 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RHBDL3P58872 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC8.03□□□□□ -1.12
RHBDL3P58872 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RHBDL3P58872 RN7SKP187-201ENST00000365536 330 ntBASIC8.03□□□□□ -1.12
RHBDL3P58872 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.03□□□□□ -1.12
RHBDL3P58872 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RHBDL3P58872 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.03□□□□□ -1.12
RHBDL3P58872 RN7SKP271-201ENST00000410528 320 ntBASIC8.03□□□□□ -1.12
RHBDL3P58872 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms