Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CIITAP33076 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CIITAP33076 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CIITAP33076 AC096537.2-201ENST00000413707 714 ntBASIC7.58□□□□□ -1.2
CIITAP33076 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 AL596268.1-201ENST00000427910 1048 ntBASIC7.58□□□□□ -1.2
CIITAP33076 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.58□□□□□ -1.2
CIITAP33076 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.58□□□□□ -1.2
CIITAP33076 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.58□□□□□ -1.2
CIITAP33076 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.58□□□□□ -1.2
CIITAP33076 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.58□□□□□ -1.2
CIITAP33076 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 RN7SL502P-201ENST00000481857 290 ntBASIC7.58□□□□□ -1.2
CIITAP33076 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.58□□□□□ -1.2
CIITAP33076 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.58□□□□□ -1.2
CIITAP33076 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.58□□□□□ -1.2
CIITAP33076 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.58□□□□□ -1.2
CIITAP33076 AL354718.1-201ENST00000619764 589 ntBASIC7.58□□□□□ -1.2
CIITAP33076 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 MAPK10-357ENST00000641831 2858 ntBASIC7.58□□□□□ -1.2
CIITAP33076 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 AC005839.1-201ENST00000624148 3213 ntBASIC7.58□□□□□ -1.2
CIITAP33076 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CIITAP33076 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CIITAP33076 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 PSMC1P4-201ENST00000515236 1327 ntBASIC7.57□□□□□ -1.2
CIITAP33076 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 USP9YP3-201ENST00000434481 1766 ntBASIC7.57□□□□□ -1.2
CIITAP33076 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.57□□□□□ -1.2
CIITAP33076 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
CIITAP33076 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 OR7A2P-201ENST00000304105 930 ntBASIC7.57□□□□□ -1.2
CIITAP33076 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CIITAP33076 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.57□□□□□ -1.2
CIITAP33076 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 VN1R53P-201ENST00000429536 957 ntBASIC7.57□□□□□ -1.2
CIITAP33076 PA2G4P1-201ENST00000442248 1197 ntBASIC7.57□□□□□ -1.2
CIITAP33076 RBMY3AP-201ENST00000449381 1145 ntBASIC7.57□□□□□ -1.2
CIITAP33076 AL445991.1-201ENST00000450381 475 ntBASIC7.57□□□□□ -1.2
CIITAP33076 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.57□□□□□ -1.2
CIITAP33076 AL034369.1-201ENST00000453808 477 ntBASIC7.57□□□□□ -1.2
CIITAP33076 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.57□□□□□ -1.2
CIITAP33076 RN7SL561P-201ENST00000488553 281 ntBASIC7.57□□□□□ -1.2
CIITAP33076 SNRPCP11-201ENST00000492453 205 ntBASIC7.57□□□□□ -1.2
CIITAP33076 NACAP5-201ENST00000509863 636 ntBASIC7.57□□□□□ -1.2
CIITAP33076 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.57□□□□□ -1.2
CIITAP33076 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.57□□□□□ -1.2
CIITAP33076 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.57□□□□□ -1.2
CIITAP33076 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.57□□□□□ -1.2
CIITAP33076 AC011921.2-201ENST00000589465 152 ntBASIC7.57□□□□□ -1.2
CIITAP33076 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.57□□□□□ -1.2
CIITAP33076 HTR1DP1-201ENST00000616500 888 ntBASIC7.57□□□□□ -1.2
CIITAP33076 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 RBPJP6-201ENST00000411556 1431 ntBASIC7.57□□□□□ -1.2
CIITAP33076 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 AC083806.2-201ENST00000617795 2685 ntBASIC7.57□□□□□ -1.2
CIITAP33076 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CIITAP33076 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.57□□□□□ -1.2
CIITAP33076 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CIITAP33076 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
CIITAP33076 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.56□□□□□ -1.2
CIITAP33076 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.56□□□□□ -1.2
CIITAP33076 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CIITAP33076 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 PPIAP24-201ENST00000328558 471 ntBASIC7.56□□□□□ -1.2
CIITAP33076 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CIITAP33076 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 SNORA7A-201ENST00000384765 139 ntBASIC7.56□□□□□ -1.2
CIITAP33076 RNA5SP155-201ENST00000411154 129 ntBASIC7.56□□□□□ -1.2
CIITAP33076 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CIITAP33076 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.56□□□□□ -1.2
CIITAP33076 GAPDHP33-201ENST00000443168 1013 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms