Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 ATP5BP1-201ENST00000411980 1574 ntBASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA1Q9UND3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC102941.1-201ENST00000567616 1537 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC022819.1-201ENST00000563495 3910 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 RPSAP60-201ENST00000415403 880 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 RPL24P2-201ENST00000421023 475 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 CEACAMP5-201ENST00000448037 961 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 RBMY3AP-201ENST00000449381 1145 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AL445991.1-201ENST00000450381 475 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 PGBD4P1-201ENST00000473644 407 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC084851.2-201ENST00000530377 364 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC007537.1-201ENST00000539347 327 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 OR5BK1P-201ENST00000550421 823 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC111186.1-201ENST00000604684 130 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AP005212.3-201ENST00000619964 528 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 MIR6503-201ENST00000622884 86 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC087269.2-201ENST00000641764 975 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AL359263.1-201ENST00000441188 2796 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC007993.1-201ENST00000621298 2430 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 AC092701.1-201ENST00000623627 1551 ntBASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA1Q9UND3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 SPATA20P1-201ENST00000423089 438 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC092601.1-201ENST00000444526 383 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 RPS18P1-201ENST00000447840 458 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 RN7SL834P-201ENST00000461450 286 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 RN7SL393P-201ENST00000463588 296 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC135721.2-201ENST00000464237 300 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC015524.1-201ENST00000491585 472 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC138517.1-201ENST00000515724 568 ntBASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
NPIPA1Q9UND3 AC087575.1-201ENST00000585087 229 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms