Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC007012.2-201ENST00000623206 1676 ntBASIC5.75□□□□□ -1.49
BEST4Q8NFU0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.75□□□□□ -1.49
BEST4Q8NFU0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BEST4Q8NFU0 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CDY19P-201ENST00000411668 1613 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CDY18P-201ENST00000438294 1609 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AP002800.1-201ENST00000624982 2225 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC116036.1-201ENST00000412199 367 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AL139415.1-201ENST00000424862 352 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 HBBP1-201ENST00000433329 439 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 RPL21P33-201ENST00000444831 484 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 WBP1LP1-201ENST00000460451 896 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 RN7SL608P-201ENST00000492377 279 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC233290.1-201ENST00000553021 1186 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 UBE2CP4-201ENST00000561405 535 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AL078623.1-201ENST00000602702 907 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AL669830.1-201ENST00000621457 656 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 MIR6834-201ENST00000622807 81 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
BEST4Q8NFU0 Z95114.1-201ENST00000624264 14574 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 AP000432.2-201ENST00000624164 2048 ntBASIC5.74□□□□□ -1.49
BEST4Q8NFU0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC096992.2-201ENST00000609553 1684 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC011369.2-201ENST00000624423 1567 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 U3.1-201ENST00000362500 215 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 RN7SKP118-201ENST00000364331 330 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL360271.1-201ENST00000395679 510 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL034372.1-201ENST00000407586 754 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 RN7SKP148-201ENST00000410179 275 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC009237.9-201ENST00000414800 347 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AC245452.2-201ENST00000435222 392 ntBASIC5.73□□□□□ -1.49
BEST4Q8NFU0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BEST4Q8NFU0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms