Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.07□□□□□ -1.12
RHBDL3P58872 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RHBDL3P58872 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AL157831.2-201ENST00000564681 3095 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 THAP12P8-201ENST00000447914 2115 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 UGT2B25P-201ENST00000511504 1586 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC090220.1-201ENST00000593078 1699 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RHBDL3P58872 BMP6P1-201ENST00000431230 679 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 SNRPBP1-201ENST00000443634 282 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC234771.2-201ENST00000445718 597 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.06□□□□□ -1.12
RHBDL3P58872 RPL7AP23-201ENST00000482625 776 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC110056.1-201ENST00000525759 911 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC121758.1-202ENST00000556917 658 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC8.06□□□□□ -1.12
RHBDL3P58872 MT1CP-201ENST00000567054 174 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC8.06□□□□□ -1.12
RHBDL3P58872 ANP32BP1-202ENST00000568553 737 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC012368.3-201ENST00000604190 219 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 uc_338.29-201ENST00000615099 168 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC243960.7-201ENST00000623532 707 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 TEX41-255ENST00000626404 610 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.06□□□□□ -1.12
RHBDL3P58872 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.06□□□□□ -1.12
RHBDL3P58872 FLJ42393-201ENST00000623801 2270 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 AC092821.3-202ENST00000641304 2767 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 MAPK10-357ENST00000641831 2858 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 AC241584.2-201ENST00000637142 2090 ntBASIC8.06□□□□□ -1.12
RHBDL3P58872 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RHBDL3P58872 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.06□□□□□ -1.12
RHBDL3P58872 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
RHBDL3P58872 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
RHBDL3P58872 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 MAPK10-371ENST00000641952 5209 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 MTCO1P8-201ENST00000416914 1523 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC8.05□□□□□ -1.12
RHBDL3P58872 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.05□□□□□ -1.12
RHBDL3P58872 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.05□□□□□ -1.12
RHBDL3P58872 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RHBDL3P58872 NPM1P38-201ENST00000403835 865 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AL773545.3-201ENST00000414297 706 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC8.05□□□□□ -1.12
RHBDL3P58872 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.05□□□□□ -1.12
RHBDL3P58872 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.05□□□□□ -1.12
RHBDL3P58872 AC093870.1-201ENST00000506837 213 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC8.05□□□□□ -1.12
RHBDL3P58872 AL390198.2-201ENST00000510553 222 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC093816.1-201ENST00000515076 913 ntBASIC8.05□□□□□ -1.12
RHBDL3P58872 AC021146.10-201ENST00000515628 706 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms