Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RPL23AP68-201ENST00000480924 445 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 RNA5SP438-201ENST00000516561 112 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.79□□□□□ -1.16
COL4A5P29400 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.79□□□□□ -1.16
COL4A5P29400 OR7E18P-201ENST00000592589 702 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.79□□□□□ -1.16
COL4A5P29400 AC127024.6-201ENST00000621598 424 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.79□□□□□ -1.16
COL4A5P29400 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.79□□□□□ -1.16
COL4A5P29400 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 EIF3EP1-201ENST00000433978 1316 ntBASIC7.79□□□□□ -1.16
COL4A5P29400 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
COL4A5P29400 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL4A5P29400 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 AL034417.4-202ENST00000642135 2236 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.78□□□□□ -1.16
COL4A5P29400 RPL7AP14-201ENST00000424041 802 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 AL353662.1-201ENST00000439099 327 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.78□□□□□ -1.16
COL4A5P29400 HMGN1P36-201ENST00000446623 298 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 RNA5SP434-201ENST00000516647 121 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 RNA5SP271-201ENST00000516700 88 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 IGKV2-19-201ENST00000518132 283 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 AC135626.1-201ENST00000556983 435 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 RN7SL404P-201ENST00000582421 281 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 SKA2-207ENST00000583380 583 ntTSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.78□□□□□ -1.16
COL4A5P29400 FP325330.3-201ENST00000623760 9537 ntBASIC7.78□□□□□ -1.16
COL4A5P29400 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL4A5P29400 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
COL4A5P29400 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
COL4A5P29400 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.77□□□□□ -1.16
COL4A5P29400 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 MIR937-201ENST00000401271 86 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.77□□□□□ -1.17
COL4A5P29400 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.77□□□□□ -1.17
COL4A5P29400 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.77□□□□□ -1.17
COL4A5P29400 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.77□□□□□ -1.17
COL4A5P29400 AC002553.3-201ENST00000453002 341 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC011476.1-201ENST00000466725 307 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC063943.2-201ENST00000495697 534 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC139272.1-201ENST00000505516 640 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC131392.1-201ENST00000506490 633 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.77□□□□□ -1.17
COL4A5P29400 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.77□□□□□ -1.17
COL4A5P29400 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.77□□□□□ -1.17
COL4A5P29400 MIR3176-201ENST00000582210 90 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 BUB1P1-201ENST00000603541 607 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC013244.1-201ENST00000604279 193 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AC091768.1-201ENST00000609258 930 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.77□□□□□ -1.17
COL4A5P29400 MRPL57P1-201ENST00000621486 265 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.77□□□□□ -1.17
COL4A5P29400 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.77□□□□□ -1.17
COL4A5P29400 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.77□□□□□ -1.17
COL4A5P29400 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
COL4A5P29400 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
COL4A5P29400 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.77□□□□□ -1.17
COL4A5P29400 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
COL4A5P29400 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL4A5P29400 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 RNFT1P3-201ENST00000340898 1052 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms