Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 RNA5SP284-201ENST00000384547 118 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.19□□□□□ -1.42
SPTA1P02549 RBMY2AP-201ENST00000445405 1157 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 RBMY2CP-201ENST00000448575 1157 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 RBMY2DP-202ENST00000448881 1157 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 RBMY2BP-202ENST00000451071 1156 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AP002453.1-201ENST00000492327 668 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 CYP4A44P-201ENST00000569984 154 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 AL355333.1-201ENST00000605632 279 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AC092266.1-201ENST00000610958 165 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AL352984.2-201ENST00000611153 546 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SPTA1P02549 AC130360.2-201ENST00000533477 1556 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 CASC19-238ENST00000641523 1558 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 AC068860.1-201ENST00000623701 3736 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 MAPK10-347ENST00000641762 2856 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SPTA1P02549 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SPTA1P02549 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 PPIAP24-201ENST00000328558 471 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 OR2AT2P-201ENST00000413438 905 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AL606490.8-201ENST00000441624 319 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.19□□□□□ -1.42
SPTA1P02549 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.19□□□□□ -1.42
SPTA1P02549 RPL3P13-201ENST00000550415 216 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SPTA1P02549 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 AC009955.2-201ENST00000597288 542 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AC093635.1-201ENST00000609028 555 ntBASIC6.19□□□□□ -1.42
SPTA1P02549 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SPTA1P02549 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPTA1P02549 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SPTA1P02549 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SPTA1P02549 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SPTA1P02549 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SPTA1P02549 RN7SKP103-201ENST00000363848 320 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 YWHAZP4-201ENST00000392459 708 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AP000534.2-201ENST00000412729 568 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 VDAC1P2-201ENST00000423609 850 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 VDAC1P6-201ENST00000430062 855 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.18□□□□□ -1.42
SPTA1P02549 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.18□□□□□ -1.42
SPTA1P02549 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.18□□□□□ -1.42
SPTA1P02549 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.18□□□□□ -1.42
SPTA1P02549 ST13P6-201ENST00000522430 1102 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.18□□□□□ -1.42
SPTA1P02549 AC074050.1-201ENST00000563247 211 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AC090651.1-201ENST00000567865 634 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.18□□□□□ -1.42
SPTA1P02549 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.18□□□□□ -1.42
SPTA1P02549 AC129915.3-201ENST00000634128 948 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SPTA1P02549 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.18□□□□□ -1.42
SPTA1P02549 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SPTA1P02549 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC6.18□□□□□ -1.42
SPTA1P02549 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 RPL11P4-201ENST00000332269 436 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 PPIAP22-201ENST00000358455 498 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AL359092.1-201ENST00000417156 265 ntBASIC6.18□□□□□ -1.42
SPTA1P02549 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.18□□□□□ -1.42
SPTA1P02549 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.18□□□□□ -1.42
SPTA1P02549 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPTA1P02549 AC018645.1-201ENST00000505003 109 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms