Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 UGT2B27P-201ENST00000505092 1620 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 CYP2G2P-201ENST00000594920 1485 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 MKI67P1-201ENST00000604297 1460 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.35□□□□□ -1.23
UBE4BO95155 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 OR52N3P-201ENST00000413417 934 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 GAPDHP34-201ENST00000432112 823 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 AC099340.1-201ENST00000475247 599 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 AC122714.1-201ENST00000502510 459 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 RNA5SP96-201ENST00000516041 107 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 RN7SKP98-201ENST00000517070 156 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 IGHV3-57-201ENST00000520143 280 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.35□□□□□ -1.23
UBE4BO95155 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.35□□□□□ -1.23
UBE4BO95155 ANP32BP1-202ENST00000568553 737 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AP003115.1-201ENST00000569849 463 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
UBE4BO95155 AC100832.2-201ENST00000582080 776 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC091133.5-201ENST00000603088 301 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC005393.1-201ENST00000617916 584 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC012653.2-201ENST00000621880 420 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 AC005858.3-201ENST00000624756 589 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 SNX18P10-201ENST00000625014 519 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.35□□□□□ -1.23
UBE4BO95155 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.35□□□□□ -1.23
UBE4BO95155 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
UBE4BO95155 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.35□□□□□ -1.23
UBE4BO95155 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.35□□□□□ -1.23
UBE4BO95155 RAD17P2-201ENST00000451754 1977 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
UBE4BO95155 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.35□□□□□ -1.23
UBE4BO95155 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.35□□□□□ -1.23
UBE4BO95155 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UBE4BO95155 MAPK10-365ENST00000641902 3825 ntBASIC7.35□□□□□ -1.23
UBE4BO95155 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
UBE4BO95155 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
UBE4BO95155 AC068733.2-201ENST00000605434 1418 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.34□□□□□ -1.23
UBE4BO95155 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 RNA5SP321-201ENST00000362722 111 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
UBE4BO95155 AL359694.1-201ENST00000403247 604 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.34□□□□□ -1.23
UBE4BO95155 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 AL672212.1-201ENST00000422246 400 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.34□□□□□ -1.23
UBE4BO95155 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.34□□□□□ -1.23
UBE4BO95155 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 TREML3P-201ENST00000457327 501 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 RN7SL372P-201ENST00000461982 298 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.34□□□□□ -1.23
UBE4BO95155 RN7SKP64-201ENST00000517206 328 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 IGLV3-6-201ENST00000523937 250 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.34□□□□□ -1.23
UBE4BO95155 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.34□□□□□ -1.23
UBE4BO95155 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.34□□□□□ -1.23
UBE4BO95155 AC012065.3-201ENST00000602736 439 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 AP002345.2-201ENST00000609961 904 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 AC061999.1-201ENST00000624454 177 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 AL132796.3-201ENST00000624703 900 ntBASIC7.34□□□□□ -1.23
UBE4BO95155 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
UBE4BO95155 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
UBE4BO95155 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.34□□□□□ -1.23
UBE4BO95155 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UBE4BO95155 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms