Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 POU5F1P3-201ENST00000428824 1078 ntBASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
DDX49Q9Y6V7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 BX323043.1-201ENST00000641006 1765 ntBASIC23.78■■□□□ 1.4
DDX49Q9Y6V7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 PRORSD1P-201ENST00000295112 541 ntBASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 AC091799.1-201ENST00000422823 811 ntBASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 DUSP5P2-201ENST00000426873 1033 ntBASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 AC243732.1-201ENST00000612648 864 ntBASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 KRT17P1-201ENST00000399211 1546 ntBASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX49Q9Y6V7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 AC091874.3-201ENST00000512672 1195 ntBASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
DDX49Q9Y6V7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX49Q9Y6V7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms