Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 AL512408.1-201ENST00000569378 2000 ntBASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 AC008550.1-201ENST00000511500 884 ntBASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
HRH3Q9Y5N1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 LINC01006-201ENST00000333319 2292 ntBASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HRH3Q9Y5N1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 UBE2SP1-201ENST00000450587 669 ntBASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 C1QBPP2-201ENST00000528754 825 ntBASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.33■□□□□ 0.52
HRH3Q9Y5N1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 KRT17P3-201ENST00000420566 1262 ntBASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
HRH3Q9Y5N1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 AC005829.2-201ENST00000571422 1056 ntBASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.31■□□□□ 0.52
HRH3Q9Y5N1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms