Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 AC010947.1-201ENST00000623454 693 ntBASIC26.09■■□□□ 1.77
SPG7Q9UQ90 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SPG7Q9UQ90 DPP3P2-201ENST00000416030 1696 ntBASIC26.09■■□□□ 1.77
SPG7Q9UQ90 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 KRT18P35-201ENST00000510488 1269 ntBASIC26.08■■□□□ 1.77
SPG7Q9UQ90 DUT-205ENST00000558813 769 ntTSL 2 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.08■■□□□ 1.77
SPG7Q9UQ90 KRT18P22-201ENST00000402024 1347 ntBASIC26.08■■□□□ 1.77
SPG7Q9UQ90 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
SPG7Q9UQ90 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
SPG7Q9UQ90 AC116351.2-201ENST00000606540 1585 ntBASIC26.07■■□□□ 1.76
SPG7Q9UQ90 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 AC113347.1-201ENST00000413321 391 ntBASIC26.07■■□□□ 1.76
SPG7Q9UQ90 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 AL049597.2-201ENST00000565575 961 ntBASIC26.07■■□□□ 1.76
SPG7Q9UQ90 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SPG7Q9UQ90 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 AL445675.2-201ENST00000620291 557 ntBASIC26.06■■□□□ 1.76
SPG7Q9UQ90 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPG7Q9UQ90 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 TFP1-202ENST00000475455 1573 ntBASIC26.05■■□□□ 1.76
SPG7Q9UQ90 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 PPP1R14BP5-201ENST00000440334 435 ntBASIC26.05■■□□□ 1.76
SPG7Q9UQ90 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 AL590326.2-201ENST00000625139 305 ntBASIC26.05■■□□□ 1.76
SPG7Q9UQ90 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 KRT16P6-202ENST00000425692 1426 ntBASIC26.05■■□□□ 1.76
SPG7Q9UQ90 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.05■■□□□ 1.76
SPG7Q9UQ90 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 AC026271.3-201ENST00000571884 352 ntBASIC26.04■■□□□ 1.76
SPG7Q9UQ90 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 FSCN1P1-201ENST00000568912 1481 ntBASIC26.04■■□□□ 1.76
SPG7Q9UQ90 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SPG7Q9UQ90 AF106564.1-201ENST00000607058 2553 ntBASIC26.03■■□□□ 1.76
SPG7Q9UQ90 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 AC006128.1-201ENST00000624704 1661 ntBASIC26.03■■□□□ 1.76
SPG7Q9UQ90 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 MESTP1-201ENST00000404287 994 ntBASIC26.03■■□□□ 1.76
SPG7Q9UQ90 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 YBX1P10-201ENST00000444752 975 ntBASIC26.03■■□□□ 1.76
SPG7Q9UQ90 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SPG7Q9UQ90 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms