Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GTF2A1LQ9UNN4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GTF2A1LQ9UNN4 AC019069.1-201ENST00000610008 1333 ntBASIC17.71■□□□□ 0.42
GTF2A1LQ9UNN4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
GTF2A1LQ9UNN4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.71■□□□□ 0.42
GTF2A1LQ9UNN4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GTF2A1LQ9UNN4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.69■□□□□ 0.42
GTF2A1LQ9UNN4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 AL158211.5-201ENST00000623583 2518 ntBASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 OR6D1P-202ENST00000641007 5290 ntBASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1LQ9UNN4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 ZNRF2P3-201ENST00000424200 374 ntBASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 SLC7A5P1-201ENST00000568957 537 ntBASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1LQ9UNN4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms