Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.02■□□□□ 0.95
PCDHGC3Q9UN70 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
PCDHGC3Q9UN70 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGC3Q9UN70 AC116351.2-201ENST00000606540 1585 ntBASIC21.02■□□□□ 0.95
PCDHGC3Q9UN70 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGC3Q9UN70 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 AC018553.1-201ENST00000616682 1458 ntBASIC21■□□□□ 0.95
PCDHGC3Q9UN70 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGC3Q9UN70 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGC3Q9UN70 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 RPS2P52-201ENST00000469610 820 ntBASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 UNC93B5-201ENST00000530315 699 ntBASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 SOX15-203ENST00000570788 1093 ntBASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 AC120498.8-201ENST00000614275 531 ntBASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGC3Q9UN70 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGC3Q9UN70 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms