Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC005229.4-201ENST00000610085 2198 ntBASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 NIFKP9-201ENST00000419265 221 ntBASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 KSR1P1-201ENST00000446298 240 ntBASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 AC145285.6-201ENST00000604632 637 ntBASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNMT3BQ9UBC3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 MIR1238-201ENST00000408483 83 ntBASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 AC116562.2-201ENST00000507042 360 ntBASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.8■□□□□ 0.92
DNMT3BQ9UBC3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 FP700111.2-201ENST00000619190 1892 ntBASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
DNMT3BQ9UBC3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 AL390955.1-201ENST00000428694 934 ntBASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 KRT16P1-201ENST00000399124 1418 ntBASIC20.78■□□□□ 0.92
DNMT3BQ9UBC3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNMT3BQ9UBC3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DNMT3BQ9UBC3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DNMT3BQ9UBC3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DNMT3BQ9UBC3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DNMT3BQ9UBC3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 CYP2D8P-201ENST00000433633 1490 ntBASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.76■□□□□ 0.91
DNMT3BQ9UBC3 AC005363.2-201ENST00000618631 242 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms