Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
BLOC1S4Q9NUP1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
BLOC1S4Q9NUP1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
BLOC1S4Q9NUP1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
BLOC1S4Q9NUP1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
BLOC1S4Q9NUP1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.14■■□□□ 1.14
BLOC1S4Q9NUP1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
BLOC1S4Q9NUP1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 AC116351.2-201ENST00000606540 1585 ntBASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 AP001271.2-201ENST00000624018 1556 ntBASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 UNC93B5-201ENST00000530315 699 ntBASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 AC018553.1-201ENST00000616682 1458 ntBASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.13■■□□□ 1.13
BLOC1S4Q9NUP1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 RPS2P52-201ENST00000469610 820 ntBASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 SOX15-203ENST00000570788 1093 ntBASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.12■■□□□ 1.13
BLOC1S4Q9NUP1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms