Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 TCF3P1-201ENST00000423021 1937 ntBASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 SMG8-203ENST00000578922 2178 ntBASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB16Q9NRJ7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 MIR6821-201ENST00000617625 74 ntBASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB16Q9NRJ7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB16Q9NRJ7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB16Q9NRJ7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB16Q9NRJ7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 AC004854.2-201ENST00000608450 1441 ntBASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 DPP3P2-201ENST00000416030 1696 ntBASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDHB16Q9NRJ7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB16Q9NRJ7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB16Q9NRJ7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB16Q9NRJ7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB16Q9NRJ7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB16Q9NRJ7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms