Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 SMG8-203ENST00000578922 2178 ntBASIC23.59■■□□□ 1.37
DDX4Q9NQI0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX4Q9NQI0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.58■■□□□ 1.37
DDX4Q9NQI0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
DDX4Q9NQI0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
DDX4Q9NQI0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX4Q9NQI0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.58■■□□□ 1.36
DDX4Q9NQI0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
DDX4Q9NQI0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 AC018553.1-201ENST00000616682 1458 ntBASIC23.57■■□□□ 1.36
DDX4Q9NQI0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 KSR1P1-201ENST00000446298 240 ntBASIC23.57■■□□□ 1.36
DDX4Q9NQI0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 AP006587.1-201ENST00000534129 1502 ntBASIC23.57■■□□□ 1.36
DDX4Q9NQI0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX4Q9NQI0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 C1QL1P1-201ENST00000568105 661 ntBASIC23.56■■□□□ 1.36
DDX4Q9NQI0 AC010331.1-201ENST00000611423 582 ntBASIC23.56■■□□□ 1.36
DDX4Q9NQI0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX4Q9NQI0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AC007375.3-201ENST00000600936 2314 ntBASIC23.55■■□□□ 1.36
DDX4Q9NQI0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AC116562.2-201ENST00000507042 360 ntBASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX4Q9NQI0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 KRT16P1-201ENST00000399124 1418 ntBASIC23.54■■□□□ 1.36
DDX4Q9NQI0 KRT16P6-202ENST00000425692 1426 ntBASIC23.54■■□□□ 1.36
DDX4Q9NQI0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 AL390955.1-201ENST00000428694 934 ntBASIC23.54■■□□□ 1.36
DDX4Q9NQI0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX4Q9NQI0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 MIR6786-201ENST00000616843 113 ntBASIC23.53■■□□□ 1.36
DDX4Q9NQI0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX4Q9NQI0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
DDX4Q9NQI0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms