Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 KRT8P20-201ENST00000423953 1409 ntBASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 LINC01465-201ENST00000408887 1940 ntBASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC52A3Q9NQ40 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC52A3Q9NQ40 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC52A3Q9NQ40 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 MCRIP2P1-201ENST00000394346 511 ntBASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC52A3Q9NQ40 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 ZNRF2P3-201ENST00000424200 374 ntBASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 RARRES2P4-201ENST00000514074 484 ntBASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 AC013268.1-206ENST00000638368 961 ntBASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 AC112229.1-201ENST00000639295 961 ntBASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC52A3Q9NQ40 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms