Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
VAT1LQ9HCJ6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.07■■□□□ 1.28
VAT1LQ9HCJ6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
VAT1LQ9HCJ6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
VAT1LQ9HCJ6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VAT1LQ9HCJ6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 AC239809.2-201ENST00000415381 517 ntBASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 AC093827.2-201ENST00000512654 315 ntBASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 AC124016.1-201ENST00000609552 612 ntBASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 KRT16P6-202ENST00000425692 1426 ntBASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
VAT1LQ9HCJ6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 UBE2SP1-201ENST00000450587 669 ntBASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 PRKY-204ENST00000533551 1019 ntBASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 AL121829.2-201ENST00000620908 328 ntBASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VAT1LQ9HCJ6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 GABARAPL3-202ENST00000624044 1851 ntBASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VAT1LQ9HCJ6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.02■■□□□ 1.28
VAT1LQ9HCJ6 AP006294.2-201ENST00000641667 209 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms