Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 LIN28AP1-201ENST00000429574 405 ntBASIC23.17■■□□□ 1.3
EFCC1Q9HA90 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 AL121894.2-201ENST00000602977 491 ntBASIC23.17■■□□□ 1.3
EFCC1Q9HA90 AC004264.1-201ENST00000608354 794 ntBASIC23.17■■□□□ 1.3
EFCC1Q9HA90 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 AC011484.1-201ENST00000377652 1995 ntBASIC23.17■■□□□ 1.3
EFCC1Q9HA90 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EFCC1Q9HA90 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AL391422.3-201ENST00000603791 2761 ntBASIC23.16■■□□□ 1.3
EFCC1Q9HA90 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AC116562.2-201ENST00000507042 360 ntBASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AC010203.1-204ENST00000548782 407 ntBASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AF106564.1-201ENST00000607058 2553 ntBASIC23.16■■□□□ 1.3
EFCC1Q9HA90 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.16■■□□□ 1.3
EFCC1Q9HA90 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 ATP5G1P1-201ENST00000448724 379 ntBASIC23.15■■□□□ 1.3
EFCC1Q9HA90 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 AC091076.1-201ENST00000610741 619 ntBASIC23.15■■□□□ 1.3
EFCC1Q9HA90 AC006011.2-201ENST00000621313 1158 ntBASIC23.15■■□□□ 1.3
EFCC1Q9HA90 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
EFCC1Q9HA90 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
EFCC1Q9HA90 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.14■■□□□ 1.3
EFCC1Q9HA90 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
EFCC1Q9HA90 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
EFCC1Q9HA90 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EFCC1Q9HA90 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms