Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 GUSBP6-202ENST00000438529 1198 ntBASIC25.08■■□□□ 1.61
CHMP4BQ9H444 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC25.08■■□□□ 1.61
CHMP4BQ9H444 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
CHMP4BQ9H444 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.08■■□□□ 1.6
CHMP4BQ9H444 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CHMP4BQ9H444 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
CHMP4BQ9H444 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.07■■□□□ 1.6
CHMP4BQ9H444 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.07■■□□□ 1.6
CHMP4BQ9H444 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 AC005829.2-201ENST00000571422 1056 ntBASIC25.07■■□□□ 1.6
CHMP4BQ9H444 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.07■■□□□ 1.6
CHMP4BQ9H444 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 PCDHAC2-203ENST00000615316 3011 ntBASIC25.07■■□□□ 1.6
CHMP4BQ9H444 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CHMP4BQ9H444 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 AC097658.1-201ENST00000475555 843 ntBASIC25.06■■□□□ 1.6
CHMP4BQ9H444 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHMP4BQ9H444 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.05■■□□□ 1.6
CHMP4BQ9H444 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CHMP4BQ9H444 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CHMP4BQ9H444 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms