Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AL158152.1-201ENST00000602652 1435 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC092111.2-201ENST00000611627 1414 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 BNIP3P1-202ENST00000550043 1585 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 AC066616.2-201ENST00000559334 1481 ntBASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
KRTAP4-4Q9BYR3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AIRN-201ENST00000601203 4374 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC022415.1-201ENST00000472362 1517 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 LHX9-202ENST00000367388 758 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ARL4AP5-201ENST00000404372 599 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 TLE1P1-201ENST00000422965 589 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC092810.1-201ENST00000429208 1224 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 MTND1P20-201ENST00000430341 950 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC092447.4-201ENST00000436042 673 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC096631.2-201ENST00000436136 790 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC092641.1-201ENST00000440229 772 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC004837.1-201ENST00000446267 564 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AK3-203ENST00000447596 705 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AP000547.1-201ENST00000454360 617 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 RPS3AP6-201ENST00000484430 795 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 WBP1LP4-201ENST00000505043 344 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 ARHGEF38-IT1-201ENST00000512262 456 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC093677.1-201ENST00000514414 678 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC079866.1-201ENST00000534985 1220 ntBASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP4-4Q9BYR3 AC107241.1-201ENST00000560280 434 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms