Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREX2Q9BQ50 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.67■□□□□ 0.58
TREX2Q9BQ50 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 RARRES2P4-201ENST00000514074 484 ntBASIC18.66■□□□□ 0.58
TREX2Q9BQ50 RNA5SP413-201ENST00000516373 109 ntBASIC18.66■□□□□ 0.58
TREX2Q9BQ50 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREX2Q9BQ50 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 AC100791.3-201ENST00000617619 330 ntBASIC18.65■□□□□ 0.58
TREX2Q9BQ50 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREX2Q9BQ50 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.58
TREX2Q9BQ50 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.64■□□□□ 0.58
TREX2Q9BQ50 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 MCRIP2P1-201ENST00000394346 511 ntBASIC18.64■□□□□ 0.57
TREX2Q9BQ50 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.64■□□□□ 0.57
TREX2Q9BQ50 TMEM179-206ENST00000616017 1645 ntBASIC18.63■□□□□ 0.57
TREX2Q9BQ50 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.63■□□□□ 0.57
TREX2Q9BQ50 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 AC098590.1-201ENST00000468126 897 ntBASIC18.63■□□□□ 0.57
TREX2Q9BQ50 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 MYC-209ENST00000641252 345 ntBASIC18.63■□□□□ 0.57
TREX2Q9BQ50 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 PTBP1P-201ENST00000554374 1601 ntBASIC18.63■□□□□ 0.57
TREX2Q9BQ50 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
TREX2Q9BQ50 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TREX2Q9BQ50 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.62■□□□□ 0.57
TREX2Q9BQ50 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TREX2Q9BQ50 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms