Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF11Q99590 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF11Q99590 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF11Q99590 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF11Q99590 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SCAF11Q99590 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF11Q99590 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC28.72■■■□□ 2.19
SCAF11Q99590 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC28.72■■■□□ 2.19
SCAF11Q99590 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF11Q99590 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF11Q99590 LINC01238-205ENST00000567549 1107 ntBASIC28.72■■■□□ 2.19
SCAF11Q99590 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC28.72■■■□□ 2.19
SCAF11Q99590 LINC00565-201ENST00000562710 2331 ntBASIC28.71■■■□□ 2.19
SCAF11Q99590 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC28.71■■■□□ 2.19
SCAF11Q99590 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
SCAF11Q99590 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
SCAF11Q99590 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
SCAF11Q99590 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 FAM8A6P-201ENST00000407496 1135 ntBASIC28.71■■■□□ 2.19
SCAF11Q99590 AC117947.1-201ENST00000427448 529 ntBASIC28.71■■■□□ 2.19
SCAF11Q99590 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC28.71■■■□□ 2.19
SCAF11Q99590 ABBA01031674.1-201ENST00000635145 728 ntBASIC28.71■■■□□ 2.19
SCAF11Q99590 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SCAF11Q99590 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.19
SCAF11Q99590 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC28.7■■■□□ 2.19
SCAF11Q99590 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC28.7■■■□□ 2.19
SCAF11Q99590 FSCN1P1-201ENST00000568912 1481 ntBASIC28.7■■■□□ 2.18
SCAF11Q99590 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
SCAF11Q99590 COPE-203ENST00000351079 907 ntTSL 2 BASIC28.7■■■□□ 2.18
SCAF11Q99590 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC28.7■■■□□ 2.18
SCAF11Q99590 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
SCAF11Q99590 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC28.7■■■□□ 2.18
SCAF11Q99590 KRT126P-201ENST00000549467 1181 ntBASIC28.7■■■□□ 2.18
SCAF11Q99590 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SCAF11Q99590 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SCAF11Q99590 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF11Q99590 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC28.69■■■□□ 2.18
SCAF11Q99590 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
SCAF11Q99590 TPM4P1-201ENST00000436100 807 ntBASIC28.69■■■□□ 2.18
SCAF11Q99590 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC28.69■■■□□ 2.18
SCAF11Q99590 KRT18P56-201ENST00000507275 550 ntBASIC28.69■■■□□ 2.18
SCAF11Q99590 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF11Q99590 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC28.69■■■□□ 2.18
SCAF11Q99590 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SCAF11Q99590 KRT8P36-201ENST00000489121 1440 ntBASIC28.69■■■□□ 2.18
SCAF11Q99590 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF11Q99590 AC079834.2-201ENST00000609776 1949 ntBASIC28.68■■■□□ 2.18
SCAF11Q99590 PPP1R14BP5-201ENST00000440334 435 ntBASIC28.68■■■□□ 2.18
SCAF11Q99590 AC009947.2-201ENST00000444014 672 ntBASIC28.68■■■□□ 2.18
SCAF11Q99590 B3GAT3P1-201ENST00000471720 806 ntBASIC28.68■■■□□ 2.18
SCAF11Q99590 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.68■■■□□ 2.18
SCAF11Q99590 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC28.68■■■□□ 2.18
SCAF11Q99590 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SCAF11Q99590 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF11Q99590 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF11Q99590 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF11Q99590 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SCAF11Q99590 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SCAF11Q99590 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
SCAF11Q99590 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
SCAF11Q99590 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 AL031133.1-201ENST00000406807 723 ntBASIC28.67■■■□□ 2.18
SCAF11Q99590 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF11Q99590 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 GRAMD4P8-201ENST00000605465 1115 ntBASIC28.67■■■□□ 2.18
SCAF11Q99590 AL445675.2-201ENST00000620291 557 ntBASIC28.67■■■□□ 2.18
SCAF11Q99590 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC28.67■■■□□ 2.18
SCAF11Q99590 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SCAF11Q99590 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC28.67■■■□□ 2.18
SCAF11Q99590 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC28.66■■■□□ 2.18
SCAF11Q99590 SAPCD2P2-201ENST00000431719 1174 ntBASIC28.66■■■□□ 2.18
SCAF11Q99590 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SCAF11Q99590 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC28.66■■■□□ 2.18
SCAF11Q99590 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC28.66■■■□□ 2.18
SCAF11Q99590 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
SCAF11Q99590 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
SCAF11Q99590 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SCAF11Q99590 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SCAF11Q99590 BX664615.1-201ENST00000443558 458 ntBASIC28.66■■■□□ 2.18
SCAF11Q99590 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms